Taxonomic informatics tools for the electronic Nomenclator Zoologicus
Related Experiment Video
Updated: Aug 11, 2026

A Concoction Pipeline for Generating Molecular Operational Taxonomic Units (MOTUs) Among Riparian and Aquatic Beetles
Published on: July 11, 2025
David P Remsen1, Catherine Norton, David J Patterson
1Marine Biological Laboratory, Woods Hole, Massachusetts 02543, USA. dremsen@mbl.edu
Abstract:
Given the current trends, it seems inevitable that all biological documents will eventually exist in a digital format and be distributed across the internet. New network services and tools need to be developed to increase retrieval rates for documents and to refine data recovery. Biological data have traditionally been well managed using taxonomic principles. As part of a larger initiative to build an array of names-based network services that emulate taxonomic principles for managing biological information, we undertook the digitization of a major taxonomic reference text, Nomenclator Zoologicus. The process involved replicating the text to a high level of fidelity, parsing the content for inclusion within a database, developing tools to enable expert input into the product, and integrating the metadata and factual content within taxonomic network services. The result is a high-quality and freely available web application (http://uio.mbl.edu/NomenclatorZoologicus/) capable of being exploited in an array of biological informatics services.
Related Concept Videos
Applications of Molecular Taxonomy
Modern Molecular Taxonomy
Methods of Classification and Identification
The Tree of Life - Bacteria, Archaea, Eukaryotes
Evolutionary Relationships through Genome Comparisons
Taxonomy

