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The peripheral blood transcriptome dynamically reflects system wide biology: a potential diagnostic tool
Choong-Chin Liew1, Jun Ma, Hong-Chang Tang
1ChondroGene, Inc., Toronto, Ontario, Canada. cliew@chondrogene.com
The Journal of Laboratory and Clinical Medicine
|March 1, 2006
Summary
Peripheral blood cells express most human genes, including tissue-specific ones. This finding supports the "Sentinel Principle," suggesting blood can be used for disease diagnosis and prognosis.
Area of Science:
- Genomics
- Molecular Biology
- Biochemistry
Background:
- Peripheral blood cells are a readily accessible source of biological information.
- Gene expression profiling offers insights into cellular function and disease states.
Purpose of the Study:
- To comprehensively survey gene expression in human peripheral blood cells.
- To investigate the presence of tissue-specific transcripts in blood.
- To explore the potential of blood as a diagnostic tool for disease detection.
Main Methods:
- Genome-wide gene expression analysis using expressed sequence tag (EST) and microarray hybridization.
- Reverse-transcription polymerase chain reaction (RT-PCR) for detecting low-abundance transcripts.
Main Results:
- Approximately 80% of human genes are expressed in peripheral blood cells.
- Over 80% of expressed genes in blood show overlap with any given human tissue.
- Tissue-specific transcripts (e.g., beta-myosin heavy chain, insulin) were detected in circulating blood cells.
- Environmental factors influence transcriptional regulation of insulin in peripheral blood.
Conclusions:
- Peripheral blood harbors a vast array of gene transcripts, reflecting systemic physiological and pathological conditions.
- The detection of tissue-specific transcripts supports the
- Sentinel Principle,
- positioning blood as a potential surrogate tissue for disease diagnosis and prognosis.