Related Experiment Video
Updated: Aug 8, 2026

Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry
Published on: July 17, 2019
Simple thermodynamics for unravelling sophisticated self-assembly processes
Josef Hamacek1, Michal Borkovec, Claude Piguet
1Department of Inorganic, Analytical and Applied Chemistry, University of Geneva, 30 quai Ernest Ansermet, CH-1211 Geneva 4.
This perspective models free energy changes in multicomponent coordination chemistry self-assemblies. It adapts biological models to understand cooperativity and intra-/intermolecular interactions for designing complex metal-ligand systems.
Area of Science:
- Coordination Chemistry
- Supramolecular Chemistry
- Chemical Thermodynamics
Background:
- Coordination chemistry has advanced towards multicomponent assemblies using multiple ligands and metal ions.
- Structural aspects of complexation reactions are well-recognized for designing molecular architectures.
- Energetic aspects of self-assembly are emerging as key for controlling and programming these processes.
Purpose of the Study:
- To focus on modeling free energy changes during self-assembly processes in coordination chemistry.
- To adapt the protein-ligand model for describing multicomponent assemblies.
- To analyze cooperativity and entropic contributions in complexation reactions.
Main Methods:
- Adaptation of the protein-ligand model to coordination chemistry.
- Introduction of concepts for cooperativity (extra energy cost from intercomponent interactions).
- Incorporation of entropic concepts separating intra- and intermolecular complexation.
- Development of the extended site binding model.
Main Results:
- The adapted protein-ligand model addresses cooperativity in multicomponent assemblies.
- Separating intra- and intermolecular complexation provides insights into entropic contributions.
- The extended site binding model dissects free energy changes using minimal microscopic parameters.
- Applications demonstrate the potential and limitations of the discussed models.
Conclusions:
- Thermodynamic modeling is crucial for understanding and controlling complex self-assembly processes.
- The extended site binding model offers a powerful tool for analyzing sophisticated metal-ligand systems.
- This work provides a framework for dissecting energetic contributions in multicomponent coordination chemistry.
More Related Videos
09:34Synthesis of Information-bearing Peptoids and their Sequence-directed Dynamic Covalent Self-assembly
Published on: February 6, 2020
04:09Demonstrating the Simplicity and In Situ Temperature Monitoring of the Mechanochemical Synthesis of Metal Chalcogenides Suitable for Thermoelectrics
Published on: August 30, 2024
Related Concept Videos
Second Law of Thermodynamics
Entropy
Second Law of Thermodynamics
Thermodynamic Systems
Consider an example of tea boiling in a kettle. The tea and...
Entropy
When an ideal gas expands isothermally, the disorder in the gas increases. From the molecular perspective, the gas molecules have more volume to move around in.
Consider an infinitesimal step in the expansion, which...
Thermodynamic Processes