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Updated: Aug 9, 2026

Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
RAB32 hypermethylation and microsatellite instability in gastric and endometrial adenocarcinomas
David Shibata1, Yuriko Mori, Kun Cai
1Division of Gastrointestinal Oncology, Department of Interdisciplinary Oncology, H. Lee Moffitt Cancer Center and Research Institute, University of South Florida College of Medicine, Tampa, FL 33612, USA. shibatd@moffitt.usf.edu
Abstract:
The recently described gene, RAB32, is a ras proto-oncogene family member that encodes an A-kinase-anchoring protein. RAB32 has been found to be frequently hypermethylated in microsatellite instability-high (MSI-H) colon cancers. We sought to determine the prevalence of RAB32 hypermethylation in gastric and endometrial adenocarcinomas, the 2 other major tumor types in which MSI-H is common. Moreover, we delineated the association of RAB32 hypermethylation with microsatellite instability (MSI) and hMLH1 hypermethylation. MSI status and hypermethylation of the RAB32 and hMLH1 genes were studied in paired primary normal and tumor tissues from 48 patients with gastric cancer. An additional 80 endometrial cancer patients were studied for RAB32 methylation and MSI status. Thirteen (27%) of 48 gastric cancers demonstrated evidence of RAB32 hypermethylation. MSI status was determined in 46 of the tumors, with 7 (100%) of 7 MSI-H tumors, 1 (33%) of 3 MSI-low (MSI-L) tumors and 4 (11%) of 36 microsatellite-stable (MSS) tumors found to harbor RAB32 hypermethylation. RAB32 methylation was significantly associated with intestinal type histology and concomitant hMLH1 hypermethylation in gastric cancer. In contrast, RAB32 methylation occurred in only 1 of 80 endometrial cancers, including 20 MSI-H, 8 MSI-L and 52 MSS tumors. Hypermethylation of hMLH1 was noted in 16 (20%) of 80 endometrial tumors. We conclude that although RAB32 methylation is rare in endometrial cancers, it is strongly associated with hMLH1 hypermethylation and MSI in gastric adenocarcinomas. Given its similar involvement in colon cancer, RAB32 inactivation may represent a component of the oncogenic pathway of microsatellite-unstable gastrointestinal adenocarcinomas.
Insights
RAB32 gene hypermethylation is common in gastric cancers, particularly those with microsatellite instability (MSI-H), and linked to hMLH1 hypermethylation. It is rare in endometrial cancers.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Genetics
Background:
- RAB32, a ras proto-oncogene family member, encodes an A-kinase-anchoring protein.
- RAB32 hypermethylation is frequent in microsatellite instability-high (MSI-H) colon cancers.
- MSI-H is also common in gastric and endometrial adenocarcinomas.
Purpose of the Study:
- To investigate RAB32 hypermethylation prevalence in gastric and endometrial adenocarcinomas.
- To determine the association of RAB32 hypermethylation with microsatellite instability (MSI) and hMLH1 hypermethylation.
- To explore RAB32's role in the oncogenic pathway of microsatellite-unstable gastrointestinal adenocarcinomas.
Main Methods:
- Studied MSI status and RAB32/hMLH1 hypermethylation in paired normal and tumor tissues from 48 gastric cancer patients.
- Analyzed RAB32 methylation and MSI status in 80 endometrial cancer patients.
- Utilized methylation-specific analyses and MSI detection techniques.
Main Results:
- RAB32 hypermethylation was found in 27% of gastric cancers, strongly associated with MSI-H tumors (100%) and hMLH1 hypermethylation.
- RAB32 methylation was significantly linked to intestinal type histology in gastric cancer.
- RAB32 methylation was rare (1.25%) in endometrial cancers, despite frequent hMLH1 hypermethylation (20%).
Conclusions:
- RAB32 hypermethylation is strongly associated with hMLH1 hypermethylation and MSI in gastric adenocarcinomas.
- RAB32 inactivation may be part of the oncogenic pathway in microsatellite-unstable gastrointestinal adenocarcinomas.
- RAB32 hypermethylation is not a common event in endometrial cancers.
