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Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies
Published on: May 6, 2022
[Nutritional epigenomics of metabolic syndrome]
Claudine Junien1, Catherine Gallou-Kabani, Alexandre Vigé
1Inserm U.383, Génétique, chromosome et cancer, Hôpital Necker Enfants-Malades, 149, rue de Sèvres, 75743 Paris Cedex 15, France. junien@necker.fr
Abstract:
The importance of epigenetic alterations has been acknowledged in cancer for about two decades by an increasing number of molecular oncologists who contributed to deciphering the epigenetic codes and machinery and opened the road for a new generation of drugs now in clinical trials. However, the relevance of epigenetics to common diseases such as metabolic syndrome and cardiovascular disease was less conspicuous. This review focuses on converging data supporting the hypothesis that, in addition to "thrifty genotype" inheritance, individuals with metabolic syndrome (MetS)--combining disturbances in glucose and insulin metabolism, excess of predominantly abdominally distributed weight, mild dyslipidemia and hypertension, with the subsequent development of obesity, type 2 diabetes mellitus (T2D) and cardiovascular disease (CVD)--have suffered improper "epigenetic programing" during their fetal/postnatal development due to maternal inadequate nutrition and metabolic disturbances and also during their life-time. Moreover, as seen for obesity and T2D, MetS tends to appear earlier in childhood, to be more severe from generation to generation and to affect more pregnant women. Thus, in addition to maternal effects, MetS patients may display "transgenerational effects" via the incomplete erasure of epigenetic marks endured by their parents and grandparents. We highlight the susceptibility of epigenetic mechanisms controlling gene expression to environmental influences due to their inherent malleability, emphasizing the participation of transposable elements and the potential role of imprinted genes during critical time windows in epigenetic programming, from the very beginning of development throughout life. Increasing our understanding on epigenetic patterns significance and small molecules (nutrients, drugs) that reverse epigenetic (in) activation should provide us with the means to he obsolete human thrifty genotype into a "squandering" phenotype.
Insights
Epigenetic programming errors, influenced by maternal nutrition and environment, contribute to metabolic syndrome (MetS) and cardiovascular disease (CVD). These epigenetic changes may even pass between generations, impacting disease risk.
Area of Science:
- Molecular Biology
- Genetics
- Endocrinology
Background:
- Epigenetic alterations are well-established in cancer, driving new drug development.
- The role of epigenetics in common non-cancerous diseases like metabolic syndrome (MetS) and cardiovascular disease (CVD) is less understood.
- MetS involves metabolic disturbances, obesity, hypertension, and dyslipidemia, increasing risks for type 2 diabetes mellitus (T2D) and CVD.
Purpose of the Study:
- To review evidence supporting the role of "epigenetic programming" in the development of MetS.
- To explore how maternal nutrition, environmental factors, and critical developmental periods influence epigenetic modifications.
- To discuss the potential for transgenerational epigenetic inheritance in MetS.
Main Methods:
- Review of existing scientific literature and data on epigenetics, MetS, and related conditions.
- Analysis of mechanisms including maternal nutrition, environmental influences, transposable elements, and imprinted genes.
- Examination of disease progression patterns, including earlier onset and increased severity across generations.
Main Results:
- Converging data suggest improper epigenetic programming during development and throughout life contributes to MetS.
- Environmental factors and maternal metabolic status significantly impact epigenetic patterns.
- Evidence indicates potential transgenerational effects of epigenetic marks in MetS patients.
- Transposable elements and imprinted genes play a role in epigenetic programming during critical developmental windows.
Conclusions:
- Epigenetics is a crucial factor in the development of MetS and CVD, beyond the "thrifty genotype" hypothesis.
- Understanding epigenetic mechanisms offers new avenues for preventing and treating MetS and associated diseases.
- Targeting epigenetic modifications with nutrients or drugs could reverse detrimental "thrifty genotype" phenotypes.
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