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A quantitative trait locus (QTL) on chromosome 6q influences birth weight in two independent family studies
Rector Arya1, Ellen Demerath, Christopher P Jenkinson
1Division of Clinical Epidemiology, University of Texas Health Science Center, 7703 Floyd Curl Drive, San Antonio, 78229-3900, USA. arya@uthscsa.edu
Insights
Researchers identified a major gene influencing birth weight on chromosome 6q. This finding, significant for understanding infant health and later-life diseases, was replicated across Mexican- and European-American populations.
Area of Science:
- Genetics
- Human Development
- Complex Disease Etiology
Background:
- Low birth weight (LBW) is a significant global contributor to infant mortality and morbidity.
- LBW is inversely correlated with adult complex diseases, including obesity, type-2 diabetes, and cardiovascular disease.
- Genetic factors influencing birth weight and its long-term health associations remain largely uncharacterized.
Purpose of the Study:
- To conduct a genome-wide search for genes influencing birth weight variation.
- To investigate the genetic basis of birth weight in Mexican-American and European-American populations.
- To identify genetic loci associated with fetal growth and development.
Main Methods:
- Genome-wide search utilizing data from the San Antonio Family Birth Weight Study (n=840).
- Estimation of birth weight heritability adjusted for sex and term.
- Multipoint linkage analysis to identify chromosomal regions linked to birth weight variation.
- Replication analysis in an independent European-American cohort.
Main Results:
- Heritability of birth weight was estimated at 72.0+/-8.4% (P<0.0001).
- Strongest evidence for linkage (LOD=3.7) was identified on chromosome 6q between markers D6S1053 and D6S1031, replicated with LOD=2.3 in a European-American population, yielding an adjusted LOD of 4.3.
- Potential candidate genes in the 6q region include chorionic gonadotropin, alpha chain; collagen, type XIX, alpha-1; and protein-tyrosine phosphatase, type 4A, 1.
- Additional suggestive linkage evidence (LODs 1.3-2.7) was found on chromosomes 1q, 2q, 3q, 4q, 9p, 19p, and 19q.
Conclusions:
- Substantial evidence supports a major locus on chromosome 6q influencing birth weight variation.
- This locus plays a role in fetal growth and development.
- The identified genetic influence on birth weight is consistent across both Mexican- and European-American populations, highlighting its broad relevance.
Abstract:
Low birth weight is an important cause of infant mortality and morbidity worldwide. Birth weight has been shown to be inversely correlated with adult complex diseases such as obesity, type-2 diabetes and cardiovascular disease. However, little is known about the genetic factors influencing variation in birth weight and its association with diseases that occur in later life. We, therefore, have performed a genome-wide search to identify genes that influence birth weight in Mexican-Americans using the data from the San Antonio Family Birth Weight Study participants (n=840). Heritability of birth weight was estimated as 72.0+/-8.4% (P<0.0001) after adjusting for the effects of sex and term. Multipoint linkage analysis yielded the strongest evidence for linkage of birth weight (LOD=3.7) between the markers D6S1053 and D6S1031 on chromosome 6q. This finding has been replicated (LOD=2.3) in an independent European-American population. Together, these findings provide substantial evidence (LOD(adj)=4.3) for a major locus influencing variation in birth weight. This region harbors positional candidate genes such as chorionic gonadotropin, alpha chain; collagen, type XIX, alpha-1; and protein-tyrosine phosphatase, type 4A, 1 that may play a role in fetal growth and development. In addition, potential evidence for linkage (LOD>or=1.2) was found on chromosomes 1q, 2q, 3q, 4q, 9p, 19p and 19q with LODs ranging from 1.3 to 2.7. Thus, we have found strong evidence for a major gene on chromosome 6q that influences variation in birth weight in both Mexican- and European-Americans.
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