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A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene
Published on: April 1, 2019
PARK2/PACRG polymorphisms and susceptibility to typhoid and paratyphoid fever
S Ali1, A M Vollaard, S Widjaja
1Department of Infectious Diseases, Leiden University Medical Centre, the Netherlands.
Abstract:
Host genetic factors may contribute to susceptibility to and outcome in infectious diseases. Recently polymorphisms in PARK2/PACRG, a gene cluster linked to ubiquitination and proteasome-mediated protein degradation, were found to be associated with manifest infection by M. leprae. Here, we address whether these polymorphisms are associated with susceptibility to infection with Salmonella typhi and S. paratyphi A, intracellular pathogens that upon infection of humans share with mycobacteria aspects of the hosts' immune response. The polymorphisms of PARK_e01(-697), PARK2_e01(-2599), rs1333955 and rs1040079 were analysed by polymerase chain reaction and restriction fragment length polymorphism in a case-control study of typhoid and paratyphoid fever patients in an endemic area in Jakarta, Indonesia. For this study, samples were obtained from patients with blood culture-confirmed typhoid fever (n=90), paratyphoid fever (n=26) and fever controls (n=337) in a passive, community-based surveillance and compared to those of randomly selected community controls (n=322) from the same city area. The PARK2_e01(-2599) allele T was significantly associated with typhoid and paratyphoid fever (OR: 1.51, 95%CI: 1.02-2.23) but the other polymorphisms, PARK2_e01(-697), rs1333955 and rs1040079, were not associated. Although within the PARK2/PACRG gene cluster the PARK2_e01(-2599) allele T was most strongly associated with leprosy (OR approximately 3-5), the association with typhoid is much less strong. Our findings suggest that this polymorphism in PARK2/PACRG plays a small but significant role in susceptibility to the intracellular pathogens S. typhi and S. paratyphi.
Insights
Genetic variations in the PARK2/PACRG gene cluster may influence susceptibility to infectious diseases. A specific polymorphism, PARK2_e01(-2599) allele T, is linked to increased risk of typhoid and paratyphoid fever.
Area of Science:
- Genetics
- Immunology
- Infectious Diseases
Background:
- Host genetic factors play a role in infectious disease susceptibility and outcomes.
- Polymorphisms in the PARK2/PACRG gene cluster, involved in protein degradation, have been linked to leprosy.
- Salmonella typhi and Salmonella paratyphi A are intracellular pathogens that elicit immune responses similar to mycobacteria.
Purpose of the Study:
- To investigate the association between PARK2/PACRG gene polymorphisms and susceptibility to Salmonella typhi and Salmonella paratyphi A infections.
- To determine if genetic variations in PARK2/PACRG influence the risk of developing typhoid and paratyphoid fever.
Main Methods:
- A case-control study was conducted in Jakarta, Indonesia.
- Polymorphisms PARK_e01(-697), PARK2_e01(-2599), rs1333955, and rs1040079 were analyzed using polymerase chain reaction and restriction fragment length polymorphism.
- Samples were collected from patients with confirmed typhoid fever (n=90), paratyphoid fever (n=26), fever controls (n=337), and community controls (n=322).
Main Results:
- The PARK2_e01(-2599) allele T showed a significant association with typhoid and paratyphoid fever (Odds Ratio: 1.51, 95% Confidence Interval: 1.02-2.23).
- No significant association was found for polymorphisms PARK_e01(-697), rs1333955, and rs1040079.
- The association of PARK2_e01(-2599) T with typhoid fever was less pronounced compared to its association with leprosy.
Conclusions:
- The PARK2_e01(-2599) polymorphism in the PARK2/PACRG gene cluster plays a minor but significant role in susceptibility to Salmonella typhi and Salmonella paratyphi A.
- These findings contribute to understanding the genetic basis of host susceptibility to enteric bacterial infections.
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