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Updated: Aug 7, 2026

Population and Single-Cell Analysis of Antibiotic Persistence in Escherichia coli
Published on: March 24, 2023
GlpD and PlsB participate in persister cell formation in Escherichia coli
Amy L Spoering1, Marin Vulic, Kim Lewis
1Northeastern University, Department of Biology, 405 Mugar Hall, 360 Huntington Ave., Boston, MA 02115, USA.
Abstract:
Bacterial populations produce dormant persister cells that are resistant to killing by all antibiotics currently in use, a phenomenon known as multidrug tolerance (MDT). Persisters are phenotypic variants of the wild type and are largely responsible for MDT of biofilms and stationary populations. We recently showed that a hipBA toxin/antitoxin locus is part of the MDT mechanism in Escherichia coli. In an effort to find additional MDT genes, an E. coli expression library was selected for increased survival to ampicillin. A clone with increased persister production was isolated and was found to overexpress the gene for the conserved aerobic sn-glycerol-3-phosphate dehydrogenase GlpD. The GlpD overexpression strain showed increased tolerance to ampicillin and ofloxacin, while a strain with glpD deleted had a decreased level of persisters in the stationary state. This suggests that GlpD is a component of the MDT mechanism. Further genetic studies of mutants affected in pathways involved in sn-glycerol-3-phosphate metabolism have led to the identification of two additional multidrug tolerance loci, glpABC, the anaerobic sn-glycerol-3-phosphate dehydrogenase, and plsB, an sn-glycerol-3-phosphate acyltransferase.
Insights
Bacterial persister cells exhibit multidrug tolerance (MDT). Researchers identified glycerol-3-phosphate metabolism genes, including GlpD, as crucial components of this MDT mechanism in Escherichia coli.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Bacterial populations harbor dormant persister cells exhibiting multidrug tolerance (MDT), a significant challenge in antibiotic treatment.
- Persisters are phenotypic variants responsible for the MDT observed in biofilms and stationary-phase populations.
- Previous research identified the hipBA toxin/antitoxin locus as a key factor in MDT.
Purpose of the Study:
- To identify novel genes involved in the multidrug tolerance (MDT) mechanism of persister cells in Escherichia coli.
- To investigate the role of sn-glycerol-3-phosphate metabolism in bacterial antibiotic resistance.
Main Methods:
- Screening of an Escherichia coli expression library for clones exhibiting increased ampicillin survival.
- Gene expression analysis and deletion mutant studies to assess the function of identified genes in persister formation and antibiotic tolerance.
- Genetic analysis of mutants within sn-glycerol-3-phosphate metabolism pathways.
Main Results:
- Overexpression of the aerobic sn-glycerol-3-phosphate dehydrogenase gene (glpD) significantly increased persister production and tolerance to ampicillin and ofloxacin.
- Deletion of the glpD gene resulted in a reduced level of persisters in stationary-phase cultures.
- Identification of additional MDT loci, including the anaerobic sn-glycerol-3-phosphate dehydrogenase (glpABC) and sn-glycerol-3-phosphate acyltransferase (plsB).
Conclusions:
- The aerobic sn-glycerol-3-phosphate dehydrogenase (GlpD) is a novel component of the multidrug tolerance (MDT) mechanism in Escherichia coli.
- Pathways involved in sn-glycerol-3-phosphate metabolism are critical for the formation of antibiotic-tolerant persister cells.
- Targeting GlpD and related metabolic pathways may offer new strategies to combat persistent bacterial infections.
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