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Excluded volume effect for large and small solutes in water
M V Basilevsky1, F V Grigoriev, I V Leontyev
1Karpov Institute of Physical Chemistry, ul. Vorontsovo Pole, 10, 105064 Moscow, Russia.
The Journal of Physical Chemistry. A
|July 13, 2006
Summary
This study models cavitation free energy using an information theory approach, extending a binomial cell model to cover all cavity sizes. The model accurately reproduces simulation results and aligns with bulk water properties.
Area of Science:
- Physical Chemistry
- Computational Chemistry
- Thermodynamics
Background:
- Cavitation, the formation of voids in solvents, is crucial for understanding solute behavior.
- Existing information theory (IT) approaches provide a framework for calculating cavitation free energy.
- Previous models were limited in the range of solute sizes they could accurately describe.
Purpose of the Study:
- To extend the information theory (IT) approach for calculating cavitation free energy across a wide range of cavity sizes.
- To develop a unified model that bridges the gap between small molecular solutes and large biomolecular structures.
- To validate the extended model against molecular simulation data and macroscopic solvent properties.
Main Methods:
- Applied the binomial cell model as the default distribution within the information theory (IT) framework.
- Extended the model to include two distinct binomial peaks representing volume- and surface-dependent free energy contributions.
- Utilized an interpolation procedure to connect small and large cavity regimes, validated with Monte Carlo (MC) simulations.
Main Results:
- The extended model successfully reproduces MC simulation results for spherical solutes up to 10 Å radius.
- The model captures the transition from volume-dominated effects in small cavities to surface-dominated effects in large cavities.
- The large cavity limit accurately reflects macroscopic properties of water, including surface tension and compressibility.
Conclusions:
- The extended IT binomial cell model provides a robust framework for calculating cavitation free energy across diverse solute scales.
- The model's ability to unify small and large cavity descriptions enhances its applicability in solvation studies.
- The approach offers a pathway to understanding solvation thermodynamics for both simple molecules and complex biomolecules.