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Laser Microirradiation to Study In Vivo Cellular Responses to Simple and Complex DNA Damage
Published on: January 31, 2018
Five repair pathways in one context: chromatin modification during DNA repair
Yeganeh Ataian1, Jocelyn E Krebs
1Department of Biological Sciences, University of AK Anchorage, 3211 Providence Drive, Anchorage, AK 99508, USA.
Abstract:
The eukaryotic cell is faced with more than 10 000 various kinds of DNA lesions per day. Failure to repair such lesions can lead to mutations, genomic instability, or cell death. Therefore, cells have developed 5 major repair pathways in which different kinds of DNA damage can be detected and repaired: homologous recombination, nonhomologous end joining, nucleotide excision repair, base excision repair, and mismatch repair. However, the efficient repair of DNA damage is complicated by the fact that the genomic DNA is packaged through histone and nonhistone proteins into chromatin, a highly condensed structure that hinders DNA accessibility and its subsequent repair. Therefore, the cellular repair machinery has to circumvent this natural barrier to gain access to the damaged site in a timely manner. Repair of DNA lesions in the context of chromatin occurs with the assistance of ATP-dependent chromatin-remodeling enzymes and histone-modifying enzymes, which allow access of the necessary repair factors to the lesion. Here we review recent studies that elucidate the interplay between chromatin modifiers / remodelers and the major DNA repair pathways.
Insights
Cells use five major DNA repair pathways to fix daily DNA damage. Chromatin structure poses a challenge, but chromatin remodelers and histone modifiers help repair factors access damaged DNA.
Area of Science:
- Molecular Biology
- Genetics
- Cell Biology
Background:
- Eukaryotic cells encounter over 10,000 DNA lesions daily.
- Failure to repair DNA damage can cause mutations, genomic instability, and cell death.
- Five major DNA repair pathways exist: homologous recombination, nonhomologous end joining, nucleotide excision repair, base excision repair, and mismatch repair.
Purpose of the Study:
- To review recent studies on the interplay between chromatin modifiers/remodelers and DNA repair pathways.
- To elucidate how cells overcome chromatin's barrier to DNA repair.
Main Methods:
- Review of recent scientific literature.
- Analysis of studies focusing on chromatin remodeling and DNA repair mechanisms.
Main Results:
- DNA is packaged into chromatin, a structure that impedes DNA repair.
- ATP-dependent chromatin-remodeling enzymes and histone-modifying enzymes facilitate access to damaged DNA sites.
- These enzymes are crucial for the efficient functioning of major DNA repair pathways within the chromatin context.
Conclusions:
- Chromatin accessibility is a critical factor in DNA repair efficiency.
- Chromatin modifiers and remodelers play essential roles in enabling DNA repair pathways to function.
- Understanding this interplay is key to comprehending genome stability maintenance.
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Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
