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Updated: Jul 19, 2026

Long-Read Plasmid Sequencing and Assembly Using Nanopore Sequencing-Based Workflows
Published on: July 7, 2026
PlasmoDB v5: new looks, new genomes.
Christian J Stoeckert1, Steve Fischer, Jessica C Kissinger
1Department of Genetics, 1415 Blockley Hall, Center for Bioinformatics, 423 Guardian Drive, University of Pennsylvania, Philadelphia, PA 19104, USA. stoeckrt@pcbi.upenn.edu
PlasmoDB version 5.1 offers expanded malaria parasite genomic data and a redesigned website. This update enhances its role within a linked network of Apicomplexan databases for researchers.
Area of Science:
- Genomics
- Parasitology
- Bioinformatics
Background:
- PlasmoDB is a key resource for malaria parasite genomic and functional genomics data.
- Previous versions have supported research on Plasmodium species.
Purpose of the Study:
- To announce the release of PlasmoDB version 5.1.
- To highlight new features and expanded content.
- To emphasize PlasmoDB's integration into a broader Apicomplexan database family.
Main Methods:
- Database development and website redesign.
- Integration of new Plasmodium genomes.
- Linking PlasmoDB with other Apicomplexan databases.
Main Results:
- PlasmoDB version 5.1 is now available.
- The resource includes additional Plasmodium genomes.
- A newly designed website enhances user experience and reflects database integration.
Conclusions:
- The updated PlasmoDB facilitates access to malaria parasite genomic information.
- PlasmoDB version 5.1 strengthens its position as a central hub for Apicomplexan research.
- The enhanced resource supports ongoing and future studies on malaria parasites.
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