Web-based MS/MS data analysis
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Updated: Jul 19, 2026

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
Published on: May 17, 2019
1Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland. frederique.lisacek@isb-sib.ch
Abstract:
This tutorial focuses on three MS/MS data analysis programs currently available via a web interface: Mascot, Phenyx and X!Tandem. Although these programs process the same input and often produce comparable outputs, subtle differences remain. The use of parameters that are requested in the on-line forms and the subsequent interpretation of results are illustrated and explained via a single example.
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