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Related Concept Videos

Chromatin Structure Regulates pre-mRNA Processing02:41

Chromatin Structure Regulates pre-mRNA Processing

In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...
Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
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lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA (lncRNA)...
Nuclear Export of mRNA02:31

Nuclear Export of mRNA

Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
Nuclear Export of mRNA02:31

Nuclear Export of mRNA

Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...

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A Reporter Assay to Analyze Intronic microRNA Maturation in Mammalian Cells
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A nuclear function of Hu proteins as neuron-specific alternative RNA processing regulators.

Hui Zhu1, Robert A Hasman, Victoria A Barron

  • 1Department of Genetics, School of Medicine, Case Western Reserve University, Cleveland, OH 44106, USA.

Molecular Biology of the Cell
|October 13, 2006
PubMed
Summary

Mammalian Hu proteins, crucial for neuronal function, act in the nucleus to regulate RNA processing. They block non-neuronal pathways, revealing a novel nuclear role for these key RNA-binding proteins.

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Area of Science:

  • Neuroscience
  • Molecular Biology
  • RNA Biology

Background:

  • Alternative RNA processing significantly contributes to nervous system complexity.
  • Neuron-specific RNA regulatory mechanisms remain poorly understood.
  • Mammalian Hu proteins (HuB, HuC, HuD) are RNA-binding proteins vital for neuronal differentiation and maintenance, known to enhance mRNA stability and translation in the cytoplasm.

Purpose of the Study:

  • To identify novel functions of Hu proteins in neuronal RNA processing.
  • To elucidate the mechanism by which Hu proteins regulate neuron-specific RNA processing pathways.
  • To define the first neuron-specific regulator of the calcitonin/calcitonin gene-related peptide (CGRP) system.

Main Methods:

  • Investigated the nuclear function of Hu proteins in neuron-like cells.
  • Examined the interaction between Hu proteins and TIA-1/TIAR.
  • Analyzed the regulation of calcitonin/calcitonin gene-related peptide (CGRP) pre-mRNA processing.

Main Results:

  • Hu proteins function as RNA processing regulators within the nucleus.
  • Hu proteins inhibit the activity of TIA-1/TIAR, proteins that promote non-neuronal CGRP pre-mRNA processing.
  • This inhibition establishes a neuron-specific regulatory mechanism for the CGRP system.

Conclusions:

  • Hu proteins possess a novel nuclear function in regulating RNA processing.
  • Hu proteins act as the first identified neuron-specific regulator of the calcitonin/CGRP system.
  • These findings expand our understanding of RNA processing complexity in the nervous system.