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Updated: Jul 19, 2026

A Hydrogen-Deuterium Exchange Mass Spectrometry (HDX-MS) Platform for Investigating Peptide Biosynthetic Enzymes
Published on: May 4, 2020
Measuring fast hydrogen exchange rates by NMR spectroscopy
Fatiha Kateb1, Philippe Pelupessy, Geoffrey Bodenhausen
1Ecole Normale Supérieure, Département de Chimie, associé au CNRS, 24 rue Lhomond, 75231 Paris Cedex 05, France.
We developed a new method to measure fast proton exchange rates using nuclear magnetic resonance (NMR) coherence. This technique extends the pH range for studying molecules like tryptophan.
Area of Science:
- Biophysical Chemistry
- Nuclear Magnetic Resonance (NMR) Spectroscopy
- Chemical Kinetics
Background:
- Proton exchange rates are crucial for understanding molecular dynamics and interactions.
- Traditional methods for measuring fast proton exchange are often limited in scope or applicability.
- Nuclear spin coherence provides a sensitive probe for dynamic processes in molecules.
Purpose of the Study:
- To introduce a novel NMR-based method for quantifying hydrogen exchange rates.
- To enable the measurement of proton exchange rates exceeding 10^5 s^-1.
- To extend the study of proton exchange dynamics across a wider pH range.
Main Methods:
- Utilizing the coherence of a neighboring spin (e.g., Nitrogen-15) coupled to the exchanging proton.
- Employing Carr-Purcell-Meiboom-Gill (CPMG) pulse sequences to observe coherence decay.
- Comparing coherence decay in the presence and absence of proton decoupling.
Main Results:
- Successfully measured proton exchange rates up to 10^5 s^-1.
- Extended the measurable pH range for studying indole proton exchange in tryptophan.
- Determined exchange constants for cationic, zwitterionic, and anionic forms of tryptophan.
Conclusions:
- The developed NMR method is effective for measuring fast proton exchange rates.
- This technique enhances the study of pH-dependent molecular dynamics.
- It provides valuable insights into the chemical properties of amino acids and other biomolecules.
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