Related Experiment Video
Updated: Jul 19, 2026

07:59
Functional Characterization of Endogenously Expressed Human RYR1 Variants
Published on: June 9, 2021
Structural and functional properties of two human FXYD3 (Mat-8) isoforms
Stéphanie Bibert1, Sophie Roy, Danièle Schaer
1Department of Pharmacology and Toxicology, University of Lausanne, rue du Bugnon 27, 1005 Lausanne, Switzerland.
The Journal of Biological Chemistry
|November 2, 2006
Summary
Two human FXYD3 protein variants, short and long, are differentially expressed in CaCo-2 cells and modulate Na,K-ATPase activity differently. These FXYD3 isoforms impact ion transport and cell function.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- The FXYD protein family comprises seven members that act as tissue-specific regulators of the Na,K-ATPase.
- FXYD3, also known as Mat-8, is one such protein implicated in modulating ion transport.
- Understanding FXYD3 variants is crucial for comprehending Na,K-ATPase regulation in different cellular states.
Purpose of the Study:
- To identify and characterize splice variants of human FXYD3 in CaCo-2 cells.
- To investigate the differential expression and functional properties of these FXYD3 variants.
- To determine how human FXYD3 isoforms interact with and modulate Na,K-ATPase activity.
Main Methods:
- Identification of FXYD3 splice variants in CaCo-2 cells using molecular techniques.
- Analysis of RNA and protein expression during CaCo-2 cell differentiation.
- Co-immunoprecipitation to assess protein interactions with Na,K-ATPase.
- Functional studies in Xenopus oocytes to evaluate effects on Na,K-ATPase kinetics and ion currents.
Main Results:
- Two splice variants of human FXYD3 (short and long) were identified, differing by a 26-amino acid insertion in the long variant.
- Short and long FXYD3 RNAs and proteins exhibit differential expression during CaCo-2 cell differentiation.
- Both variants associate with Na,K-ATPase, but display distinct effects on its apparent affinities for Na+ and K+ and induce hyperpolarization-activated currents.
Conclusions:
- Two human FXYD3 isoforms with distinct functional properties and differential expression patterns have been characterized.
- These findings highlight the complex regulation of Na,K-ATPase by FXYD3 variants in differentiated and non-differentiated cells.
- The study provides insights into the isoform-specific modulation of ion transport by FXYD proteins.
Related Concept Videos
Protein Complexes with Interchangeable Parts
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Globular and Fibrous Proteins
Many proteins can be classified into two distinct subtypes - globular or fibrous. These two types differ in their shapes and solubilities.
Globular proteins are also known as spheroproteins and typically are approximately round in shape. They contain a mix of amino acid types and contain differing sequences in their primary structures. Globular proteins have many different functions, such as enzymes, cellular messengers, and molecular transporters. These roles often require the proteins to be...
Globular proteins are also known as spheroproteins and typically are approximately round in shape. They contain a mix of amino acid types and contain differing sequences in their primary structures. Globular proteins have many different functions, such as enzymes, cellular messengers, and molecular transporters. These roles often require the proteins to be...
Gene Families
Gene families consist of groups of genes proposed to have originated from a common ancestor. Typically these arise through events in which a gene or genes are mistakenly duplicated during cell division. Unlike their parent genes (which are subject to selection pressure to maintain function), these gene copies do not need to preserve their sequences and may evolve at a relatively faster rate.
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...

