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Updated: Jan 9, 2026
Regulation of Hormone Secretion
Ubc9- and mms21-mediated sumoylation counteracts recombinogenic events at damaged replication forks
Dana Branzei1, Julie Sollier, Giordano Liberi
1FIRC Institute of Molecular Oncology Foundation and Department of Biomedical Sciences and Biotechnology, Università degli Studi di Milano, Via Adamello 16, 20139 Milan, Italy. dana.branzei@ifom-ieo-campus.it
Abstract:
The Ubc9 SUMO-conjugating enzyme and the Siz1 SUMO ligase sumoylate several repair and recombination proteins, including PCNA. Sumoylated PCNA binds Srs2, a helicase counteracting certain recombination events. Here we show that ubc9 mutants depend on checkpoint, recombination, and replication genes for growth. ubc9 cells maintain stalled-fork stability but exhibit a Rad51-dependent accumulation of cruciform structures during replication of damaged templates. Mutations in the Mms21 SUMO ligase resemble the ubc9 mutations. However, siz1, srs2, or pcna mutants altered in sumoylation do not exhibit the ubc9/mms21 phenotype. Like ubc9/mms21 mutants, sgs1 and top3 mutants also accumulate X molecules at damaged forks, and Sgs1/BLM is sumoylated. We propose that Ubc9 and Mms21 act in concert with Sgs1 to resolve the X structures formed during replication. Our results indicate that Ubc9- and Mms21-mediated sumoylation functions as a regulatory mechanism, different from that of replication checkpoints, to prevent pathological accumulation of cruciform structures at damaged forks.
Insights
The Ubc9 and Mms21 enzymes prevent harmful cruciform structures during DNA replication. This sumoylation pathway works with Sgs1 to maintain genome stability, distinct from replication checkpoints.
Area of Science:
- Molecular Biology
- Genetics
- DNA Repair
Background:
- Ubc9 (SUMO-conjugating enzyme) and Siz1 (SUMO ligase) modify proteins like PCNA.
- Sumoylated PCNA interacts with Srs2, a helicase that opposes recombination.
- Replication stress response pathways are crucial for maintaining genome integrity.
Purpose of the Study:
- To investigate the role of Ubc9 and Mms21 in DNA repair and replication.
- To elucidate the mechanism by which sumoylation prevents aberrant DNA structures.
- To understand the interplay between sumoylation, helicases, and genome stability.
Main Methods:
- Genetic analysis of ubc9, mms21, siz1, srs2, pcna, sgs1, and top3 mutants.
- Assessment of stalled-fork stability and cruciform structure accumulation.
- Analysis of Rad51-dependent and sumoylation-dependent processes.
Main Results:
- ubc9 mutants require checkpoint, recombination, and replication genes for growth.
- ubc9 cells accumulate Rad51-dependent cruciform structures at damaged forks.
- Ubc9 and Mms21 function with Sgs1 to resolve replication-associated X structures.
Conclusions:
- Ubc9 and Mms21-mediated sumoylation is essential for resolving pathological cruciform structures at damaged forks.
- This sumoylation pathway acts independently of canonical replication checkpoints.
- The findings reveal a novel regulatory mechanism for maintaining genome stability during replication stress.
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