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Updated: Jul 18, 2026

Analysis of Somatic Hypermutation in the JH4 intron of Germinal Center B cells from Mouse Peyer's Patches
Published on: April 20, 2021
DNA polymerase eta is the sole contributor of A/T modifications during immunoglobulin gene hypermutation in the mouse
Frédéric Delbos1, Said Aoufouchi, Ahmad Faili
1Institut National de la Santé et de la Recherche Médicale U783 (Développement du système immunitaire) and Université Paris René Descartes, Faculté de Médecine René Descartes, Site Necker-Enfants Malades, 75730 Paris Cedex 15, France.
Abstract:
Mutations at A/T bases within immunoglobulin genes have been shown to be generated by a repair pathway involving the DNA-binding moiety of the mismatch repair complex constituted by the MSH2-MSH6 proteins, together with DNA polymerase eta (pol eta). However, residual A/T mutagenesis is still observed upon inactivation in the mouse of each of these factors, suggesting that the panel of activities involved might be more complex. We reported previously (Delbos, F., A. De Smet, A. Faili, S. Aoufouchi, J.-C. Weill, and C.-A. Reynaud. 2005. J. Exp. Med. 201:1191-1196) that residual A/T mutagenesis in pol eta-deficient mice was likely contributed by another enzyme not normally involved in hypermutation, DNA polymerase kappa, which is mobilized in the absence of the normal polymerase partner. We report the complete absence of A/T mutations in MSH2-pol eta double-deficient mice, thus indicating that the residual A/T mutagenesis in MSH2-deficient mice is contributed by pol eta, now recruited by uracil N-glycosylase, the second DNA repair pathway involved in hypermutation. We propose that this particular recruitment of pol eta corresponds to a profound modification of the function of uracil glycosylase in the absence of the mismatch repair complex, suggesting that MSH2-MSH6 actively prevent uracil glycosylase from error-free repair during hypermutation. pol eta thus appears to be the sole contributor of A/T mutations in the normal physiological context.
Insights
DNA repair pathways involving MSH2-MSH6 and DNA polymerase eta (pol eta) normally prevent A/T mutations. In their absence, pol eta is the sole contributor to A/T mutations during hypermutation.
Area of Science:
- Molecular Biology
- Genetics
- DNA Repair
Background:
- A/T mutations in immunoglobulin genes are linked to the MSH2-MSH6 mismatch repair complex and DNA polymerase eta (pol eta).
- Residual A/T mutagenesis persists even when these factors are inactivated, suggesting additional repair mechanisms.
- Previous work implicated DNA polymerase kappa in A/T mutagenesis in pol eta-deficient mice.
Purpose of the Study:
- To investigate the complete absence of A/T mutations in mice lacking both MSH2 and pol eta.
- To elucidate the role of DNA polymerase eta (pol eta) and uracil N-glycosylase in A/T mutagenesis.
- To understand how the mismatch repair complex influences DNA repair pathways during hypermutation.
Main Methods:
- Generation and analysis of MSH2-pol eta double-deficient mice.
- Assessment of A/T mutation frequencies in immunoglobulin genes.
- Investigating the recruitment of DNA repair enzymes.
Main Results:
- Complete absence of A/T mutations was observed in MSH2-pol eta double-deficient mice.
- Residual A/T mutagenesis in MSH2-deficient mice is attributed to pol eta recruited by uracil N-glycosylase.
- MSH2-MSH6 complex appears to prevent error-free repair by uracil N-glycosylase during hypermutation.
Conclusions:
- DNA polymerase eta (pol eta) is the primary contributor to A/T mutations in the normal physiological context.
- The MSH2-MSH6 complex plays a critical role in directing uracil N-glycosylase towards error-free repair.
- A complex interplay exists between mismatch repair and other DNA repair pathways in maintaining genomic integrity.
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