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Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein
Published on: June 30, 2019
Characterization of a potent and selective small-molecule inhibitor of the PIM1 kinase
Sheldon Holder1, Marina Zemskova, Chao Zhang
1Center for Molecular Biology and Gene Therapy, Loma Linda University School of Medicine, 11234 Anderson Street, Loma Linda, CA 92354, USA.
Abstract:
The pim-1 kinase is a true oncogene that has been implicated in the development of leukemias, lymphomas, and prostate cancer, and is the target of drug development programs. We have used experimental approaches to identify a selective, cell-permeable, small-molecule inhibitor of the pim-1 kinase to foster basic and translational studies of the enzyme. We used an ELISA-based kinase assay to screen a diversity library of potential kinase inhibitors. The flavonol quercetagetin (3,3',4',5,6,7-hydroxyflavone) was identified as a moderately potent, ATP-competitive inhibitor (IC(50), 0.34 micromol/L). Resolution of the crystal structure of PIM1 in complex with quercetagetin or two other flavonoids revealed a spectrum of binding poses and hydrogen-bonding patterns in spite of strong similarity of the ligands. Quercetagetin was a highly selective inhibitor of PIM1 compared with PIM2 and seven other serine-threonine kinases. Quercetagetin was able to inhibit PIM1 activity in intact RWPE2 prostate cancer cells in a dose-dependent manner (ED(50), 5.5 micromol/L). RWPE2 cells treated with quercetagetin showed pronounced growth inhibition at inhibitor concentrations that blocked PIM1 kinase activity. Furthermore, the ability of quercetagetin to inhibit the growth of other prostate epithelial cell lines varied in proportion to their levels of PIM1 protein. Quercetagetin can function as a moderately potent and selective, cell-permeable inhibitor of the pim-1 kinase, and may be useful for proof-of-concept studies to support the development of clinically useful PIM1 inhibitors.
Insights
Quercetagetin selectively inhibits pim-1 kinase, a cancer-driving enzyme. This cell-permeable compound effectively reduces prostate cancer cell growth, offering a potential tool for developing new PIM1-targeted therapies.
Area of Science:
- Oncology
- Biochemistry
- Molecular Biology
Background:
- Pim-1 kinase is a known oncogene implicated in various cancers, including leukemia, lymphoma, and prostate cancer.
- Targeting pim-1 kinase is a focus for drug development programs aimed at cancer treatment.
- There is a need for selective, cell-permeable small-molecule inhibitors for studying pim-1 kinase function.
Purpose of the Study:
- To identify and characterize a selective, cell-permeable small-molecule inhibitor of pim-1 kinase.
- To evaluate the efficacy of the identified inhibitor in preclinical cancer models.
- To provide a tool for basic and translational research on pim-1 kinase.
Main Methods:
- Screening of a diversity library using an ELISA-based kinase assay to identify inhibitors.
- Structural analysis of PIM1 in complex with identified inhibitors using X-ray crystallography.
- In vitro and in cell-based assays to determine inhibitor potency, selectivity, and cellular effects.
Main Results:
- Quercetagetin was identified as a moderately potent (IC50 = 0.34 μmol/L), ATP-competitive inhibitor of pim-1 kinase.
- Crystal structures revealed diverse binding poses of quercetagetin and related flavonoids in PIM1.
- Quercetagetin demonstrated high selectivity for PIM1 over PIM2 and other kinases, and inhibited PIM1 in prostate cancer cells (ED50 = 5.5 μmol/L).
- Quercetagetin treatment led to significant growth inhibition of prostate cancer cells, correlating with PIM1 levels.
Conclusions:
- Quercetagetin is a moderately potent, selective, and cell-permeable inhibitor of pim-1 kinase.
- The findings support the use of quercetagetin for proof-of-concept studies in PIM1-related cancers.
- This inhibitor may aid in the development of novel PIM1-targeted cancer therapeutics.
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