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Updated: Jul 17, 2026

Implementation of In Vitro Drug Resistance Assays: Maximizing the Potential for Uncovering Clinically Relevant Resistance Mechanisms
Published on: December 9, 2015
In vitro drug sensitivity-gene expression correlations involve a tissue of origin dependency
C R Andersson1, M Fryknäs, L Rickardson
1The Linnaeus Center for Bioinformatics, Uppsala University, Uppsala, Sweden.
Abstract:
A major concern of chemogenomics is to associate drug activity with biological variables. Several reports have clustered cell line drug activity profiles as well as drug activity-gene expression correlation profiles and noted that the resulting groupings differ but still reflect mechanism of action. The present paper shows that these discrepancies can be viewed as a weighting of drug-drug distances, the weights depending on which cell lines the two drugs differ in.
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