Related Experiment Video
Updated: Jul 15, 2026

07:44
High-throughput Purification of Affinity-tagged Recombinant Proteins
Published on: August 26, 2012
A cDNA encoding RAP74, a general initiation factor for transcription by RNA polymerase II
A Finkelstein1, C F Kostrub, J Li
1Department of Biochemistry, Michigan State University, E. Lansing 48824.
Nature
|January 30, 1992
Summary
Researchers isolated the cDNA for human RAP74, a key component of the transcription factor RAP30/74 (TFIIF). This factor is essential for RNA polymerase II preinitiation complex formation and accurate transcription initiation.
Area of Science:
- Molecular Biology
- Gene Regulation
- Biochemistry
Background:
- RNA polymerase II requires general transcription factors for initiation.
- RAP30/74 (TFIIF) is a general transcription factor crucial for preinitiation complex assembly.
- The RAP30 subunit shares homology with bacterial sigma factors.
Purpose of the Study:
- To isolate the complementary DNA (cDNA) encoding the human RAP74 subunit.
- To characterize the role of RAP30 and RAP74 in transcription initiation.
- To assess the utility of recombinant RAP30 and RAP74 in transcription assays.
Main Methods:
- Complementary DNA (cDNA) isolation and sequencing.
- Recombinant protein expression in Escherichia coli.
- In vitro transcription assays using RNA polymerase II.
Main Results:
- Isolation of the human RAP74 cDNA.
- Demonstration that both RAP30 and RAP74 are integral components of the preinitiation complex.
- Recombinant human RAP30 and RAP74 can functionally substitute for the natural complex in transcription initiation.
Conclusions:
- The isolation of human RAP74 cDNA provides a tool for further study of TFIIF.
- Recombinant TFIIF is functional in vitro, enabling detailed mechanistic studies.
- Understanding TFIIF function is critical for deciphering the regulation of gene transcription by RNA polymerase II.
Related Concept Videos
Bacterial RNA Polymerase
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
Eukaryotic RNA Polymerases
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
RNA Polymerase II Accessory Proteins
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
Transcription Initiation
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
Bacterial RNA Polymerase
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
RNA Polymerase II Accessory Proteins
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...

