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Updated: Jul 16, 2026

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Candidate Gene Testing in Clinical Cohort Studies with Multiplexed Genotyping and Mass Spectrometry
Published on: June 21, 2018
IL13 gene polymorphism association with cord serum immunoglobulin E
Alireza Sadeghnejad1, Wilfried Karmaus, S Hasan Arshad
1Department of Epidemiology and Biostatistics, University of South Carolina, Columbia, South Carolina, USA. asadeghn@wfubmc.edu
Summary
Interleukin-13 (IL-13) gene variations influence cord serum immunoglobulin E (IgE) levels. Specifically, IL13 polymorphism rs1295685 is linked to elevated cord serum IgE, suggesting a genetic basis for early allergy risk.
Area of Science:
- Immunogenetics
- Allergy research
- Molecular biology
Background:
- Interleukin-13 (IL-13) plays a key role in immunoglobulin E (IgE) production.
- Elevated cord serum IgE is a potential indicator of allergy development later in life.
- Genetic factors, particularly IL13 gene polymorphisms, may influence early IgE levels independently of environmental exposures.
Purpose of the Study:
- To investigate the association between specific interleukin-13 (IL13) gene polymorphisms and cord serum immunoglobulin E (IgE) levels.
- To identify potential genetic markers for allergy risk present at birth.
Main Methods:
- Analysis of five single nucleotide polymorphisms (SNPs) in the IL13 gene (rs1800925, rs2066960, rs1295686, rs20541, rs1295685) in a UK birth cohort (Isle of Wight).
- Genotyping performed using pyrosequencing; linkage disequilibrium assessed with Haploview software.
- Logistic regression and Armitage-Cochran tests used for gene association analysis, adjusting for multiple confounders.
Main Results:
- SNP rs1295685 in the IL13 gene was significantly associated with higher cord serum IgE levels (p = 0.031).
- Linkage disequilibrium was observed among SNPs rs1295686, rs20541, and rs1295685.
- This study included 798 children for gene association analysis.
Conclusions:
- This is the first study to report a significant association between an IL13 gene polymorphism (rs1295685) and cord serum IgE levels.
- IL13 genetic variations may contribute to the determination of early-life IgE levels, potentially influencing future allergy development.