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Published on: November 4, 2016
[Evaluation of two techniques of molecular subtyping to study Pasteurella multocida]
G A Leotta1, I Chinen, G B Vigo
1Servicio Fisiopatogenia,Departamento Bacteriología, Instituto Nacional de Enfermedades Infecciosas--Administracidó Nacional de Laboratorios e Institutos de Salud Dr. Carlos G. Malbrin, Buenos Aires, Argentina. galeotta@anlis.gov.ar
Abstract:
Typeability, reproducibility, and discriminatory power of ERIC-PCR and Apal-PFGE to establish the genetic relation of P. multocida strains were determined. Forty-nine strains of different source, biotype, capsular group, somatic serotype, and resistance to antimicrobials were studied. By ERIC-PCR, 31 patterns were defined with 10 to 14 bands in a rank of 0.2 and 1.2 kb. By Apal-PFGE, 37 restriction patterns were established with 7 to 15 bands of 34 to 450 kb. Typeability was 100% (T=1) for ERIC-PCR, and 94% (T = 0.94) for Apal-PFGE. Reproducibility of both techniques was 100% (R=1). Discriminatory power was 93% (D = 0.93) for ERIC-PCR, and 98% (D = 0.98) for Apal-PFGE. By using both techniques, epidemiologically related strains were grouped, and unrelated strains were clearly differentiated. The value of ERIC-PCR and Apal-PFGE as complements to epidemiologic studies was demonstrated, especially when both techniques were used to analyze the strains.
Insights
Enterobacterial Repetitive Intergenic Consensus PCR (ERIC-PCR) and ApaI-Pulsed Field Gel Electrophoresis (Apal-PFGE) effectively determine genetic relationships in P. multocida strains. Combining both methods enhances epidemiological studies by accurately grouping related strains and differentiating unrelated ones.
Area of Science:
- Microbiology
- Molecular Biology
- Epidemiology
Background:
- Pasteurella multocida (P. multocida) is an important pathogen with diverse strains.
- Accurate methods are needed to establish genetic relatedness for epidemiological investigations.
Purpose of the Study:
- To evaluate the typeability, reproducibility, and discriminatory power of ERIC-PCR and Apal-PFGE for P. multocida strain typing.
- To assess the utility of these techniques, individually and in combination, for epidemiological studies.
Main Methods:
- Forty-nine P. multocida strains from various sources were analyzed using ERIC-PCR and Apal-PFGE.
- ERIC-PCR generated 31 patterns with 10-14 bands (0.2-1.2 kb).
- Apal-PFGE generated 37 patterns with 7-15 bands (34-450 kb).
Main Results:
- Both methods demonstrated 100% reproducibility.
- ERIC-PCR had 100% typeability and 93% discriminatory power.
- Apal-PFGE had 94% typeability and 98% discriminatory power.
- Combined use of both techniques effectively grouped related strains and differentiated unrelated ones.
Conclusions:
- ERIC-PCR and Apal-PFGE are reliable and powerful tools for P. multocida strain typing.
- The combination of ERIC-PCR and Apal-PFGE significantly enhances epidemiological investigations of P. multocida infections.
- These methods are valuable complements for understanding P. multocida transmission and outbreaks.
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