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Updated: Apr 24, 2026

An Optimized Protocol for Electrophoretic Mobility Shift Assay Using Infrared Fluorescent Dye-labeled Oligonucleotides
Published on: November 29, 2016
Automatic method to compare the lanes in gel electrophoresis images
Chih-Yang Lin1, Yu-Tai Ching, Yun-Liang Yang
1Department of Electrical Engineering, Ta-Hwa Institute of Technology, Hsinchu 307, Taiwan, ROC. richard@cs.nctu.edu.tw
Abstract:
Gel electrophoresis (GE) is an important tool in genomic analysis. GE results are presented using images. Each image contains several vertical lanes. Each lane consists of several horizontal bands. Two lanes are identical if the relative positions of the bands are the same. We present a computer method designed to compare the lanes and identify identical lanes. This method, developed using many image-processing techniques, is applied to segment the lanes and bands in GE images. The lanes are then converted into "position vectors" that describe the positions of the bands. Comparing lanes becomes equivalent to comparing the position vectors. This method can accurately identify identical lanes, helping biologists to identify the identical lanes from many lanes with much less effort.
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