Independent component analysis as a pretreatment method for parallel factor analysis to eliminate artefacts from
Delphine Jouan-Rimbaud Bouveresse1, Hamida Benabid, Douglas N Rutledge
1INRA, UMR 214 INRA INA P-G Ingénierie Analytique pour la Qualité des Aliments 16, Paris Cedex 05, France.
Analytica Chimica Acta
|April 10, 2007
Summary
Independent component analysis (ICA) effectively removes scattering artefacts from fluorescence data. This allows for improved parallel factor analysis (PARAFAC) component extraction and interpretation in excitation-emission fluorescence analysis.
Area of Science:
- Analytical Chemistry
- Spectroscopy
- Chemometrics
Background:
- Parallel factor analysis (PARAFAC) is widely applied to excitation-emission fluorescence data.
- Measurement artefacts like Rayleigh and Raman scattering can hinder PARAFAC component extraction and interpretation.
- Replacing spectral zones with missing values is not always optimal when informative signals overlap with artefacts.
Purpose of the Study:
- To introduce a novel method for removing scattering artefacts from fluorescence data.
- To improve the accuracy and interpretability of PARAFAC models.
- To demonstrate the utility of independent component analysis (ICA) in artefact removal.
Main Methods:
- Utilized independent component analysis (ICA) on the unfolded cubic array of fluorescence data.
- Identified and removed independent components associated with Rayleigh and Raman scattering.
- Reconstructed the excitation-emission fluorescence data cube after selective artefact removal.
- Applied PARAFAC to the artefact-corrected data.
Main Results:
- Successful identification and removal of scattering artefacts using ICA.
- Obtained satisfactory PARAFAC models after artefact removal.
- Demonstrated that the proposed method enhances the quality of fluorescence data analysis.
- Showcased the applicability of the method beyond 3D fluorescence data.
Conclusions:
- ICA is a powerful tool for removing scattering artefacts in fluorescence spectroscopy.
- The proposed selective artefact removal procedure improves PARAFAC analysis outcomes.
- This approach offers a robust alternative to traditional methods for handling spectral interferences.
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