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A parameter-space search algorithm tested on a Hodgkin-Huxley model
Michael S Reid1, Edgar A Brown, Stephen P DeWeerth
1Laboratory for Neuroengineering, Georgia Institute of Technology, 313 Ferst Drive, Atlanta, GA 30332, USA.
Abstract:
We demonstrate a parameter-space search algorithm using a computational model of a single-compartment neuron with conductance-based Hodgkin-Huxley dynamics. To classify bursting (the desired behavior), we use a simple cost function whose inputs are derived from the frequency content of the neural output. Our method involves the repeated use of a stochastic gradient descent-type algorithm to locate parameter values that allow the neural model to produce bursting within a specified tolerance. We demonstrate good results, including those showing that the utility of our algorithm improves as the pre-defined allowable parameter ranges increase and that the initial approach to our method is computationally efficient.
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