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Haplotype-specific amplification and nucleotide sequencing reveal the novel allele HLA-B*080104

B Eiz-Vesper1, R Blasczyk, P A Horn

  • 1Institute for Transfusion Medicine, Hannover Medical School, Carl-Neuberg-Street 1, 30625 Hannover, Germany.

Tissue Antigens
|June 15, 2007
PubMed

Abstract:

The novel allele human leukocyte antigen (HLA)-B*080104 differs from HLA-B*080101 by a synonymous nucleotide exchange at position 231 in exon 2 (C-->T).

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Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
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