Structural basis of functional cooperation of Tim15/Zim17 with yeast mitochondrial Hsp70

Takaki Momose1, Chié Ohshima, Masahiro Maeda

  • 1Department of Chemistry, Graduate School of Science, Nagoya University, Japan.

EMBO Reports
|June 16, 2007
PubMed

Insights

Mitochondrial heat-shock protein 70 (mtHsp70) partner Tim15

Area of Science:

  • Mitochondrial biology
  • Protein homeostasis
  • Structural biology

Background:

  • Mitochondrial heat-shock protein 70 (mtHsp70) and its partners facilitate protein import into the mitochondrial matrix.
  • Tim15 (also known as Zim17/Hep1) is a crucial mtHsp70 partner protein located on the matrix side of the inner mitochondrial membrane.
  • Understanding Tim15's structure and function is key to elucidating mitochondrial protein import mechanisms.

Purpose of the Study:

  • To determine the nuclear magnetic resonance (NMR) structure of the Tim15 core domain.
  • To investigate the role of specific Tim15 residues and structural features in yeast cell growth, mitochondrial protein import, and mtHsp70 aggregation.
  • To correlate Tim15's function in cell growth with its ability to suppress mtHsp70 aggregation.

Main Methods:

  • Nuclear Magnetic Resonance (NMR) spectroscopy to determine the 3D structure of the Tim15 core domain.
  • Site-directed mutagenesis to create Tim15 variants.
  • Functional assays in yeast to assess cell growth, mitochondrial protein import efficiency, and mtHsp70 aggregation suppression.

Main Results:

  • The NMR structure of the Tim15 core domain was determined.
  • A pair of basic residues (Arg 106 and His 107), conserved Asp 111, and a flexible loop (residues 133-137) were identified as important for Tim15 function.
  • These specific regions were found to be critical for yeast cell growth, mitochondrial protein import, and suppression of mtHsp70 aggregation in vivo.

Conclusions:

  • The study elucidated the structure of the Tim15 core domain, revealing key functional regions.
  • Specific residues and structural elements within Tim15 are essential for maintaining yeast cell viability and mitochondrial protein import.
  • Tim15's role in suppressing mtHsp70 aggregation is strongly linked to its function in cell growth, though its primary role remains under investigation.

Related Concept Videos

Energy to Drive Translocation01:37

Energy to Drive Translocation

Mitochondrial protein import is powered by two distinct energy sources: ATP hydrolysis and electrochemical potential across the inner membrane. Newly synthesized precursors are bound by cytosolic chaperones of the Hsp70 family, which guide them to the import receptors on the mitochondrial surface. Utilizing the energy of ATP hydrolysis, Hsp70 chaperones transfer these precursors to the TOM receptors on the mitochondrial outer membrane.
Generally, polypeptides are unfolded by two distinct...
Mitochondrial Precursor Proteins01:39

Mitochondrial Precursor Proteins

Mitochondrial precursors are partially unfolded or loosely folded polypeptide chains. Newly synthesized precursors are inhibited from spontaneously folding into their native conformation by the cytosolic chaperones, heat shock proteins 70 (Hsp70), and mitochondrial import stimulation factors (MSFs). Precursors bound to MSFs are guided to the TOM70-TOM37 receptors, while precursors bound to Hsp70  chaperones are targetted to TOM20-TOM22 receptor complexes.
Most of the mitochondrial precursors...
Mitochondrial Protein Sorting01:39

Mitochondrial Protein Sorting

Mitochondria are double-membrane organelles of the eukaryotes involved in cellular metabolism, signaling, ATP synthesis, and programmed cell death.  Each of these processes requires specific proteins and enzymes that must be correctly sorted to the right mitochondrial subcompartment for the proper functioning of the organelle.
Most of these mitochondrial proteins are encoded by the nucleus and imported to the mitochondria as unfolded or loosely folded precursors. Mitochondrial precursors...
Translocation of Proteins into the Mitochondria01:19

Translocation of Proteins into the Mitochondria

Mitochondrial precursors are translocated to the internal subcompartments via independent mechanisms involving distinct protein machineries called translocases.
Sorting of outer membrane proteins:
Mitochondrial outer membrane proteins are of two types: the transmembrane, beta-barrel porins, and the membrane-anchored, alpha-helical proteins. Beta-barrel porin precursors are translocated by the TOM complex and inserted into the outer mitochondrial membrane by the SAM complex. In contrast,...
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Porin Insertion in the Outer Mitochondrial Membrane01:12

Porin Insertion in the Outer Mitochondrial Membrane

Porins are beta-barrel proteins translocated to the mitochondrial outer membrane through the TOM complex into the intermembrane space. Porin precursors bind TIM chaperones within the intermembrane space and are guided to the Sorting and Assembly Machinery complex or SAM complex on the outer mitochondrial membrane.
Three models describe the assembly of porins by the SAM complex and their insertion into the outer membrane. Model 1 suggests that porins are assembled outside the SAM channel as the...