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Assays for the Specific Growth Rate and Cell-binding Ability of Rotavirus
Published on: January 28, 2019
Rotavirus infection among infants and young children in Chennai, South India
P Saravanan1, S Ananthan, M Ananthasubramanian
1Department of Microbiology, Dr. ALM PGIBMS, University of Madras, Taramani Campus, Chennai - 600 113, India.
Insights
Group A rotavirus causes severe childhood gastroenteritis globally. This study identified predominant G2 P[4,8] strains in South India, highlighting the need for molecular characterization for vaccine development.
Area of Science:
- Virology
- Epidemiology
- Public Health
Background:
- Group A rotavirus is a leading cause of severe gastroenteritis in children worldwide.
- Epidemiological studies are crucial for vaccine development and monitoring emerging rotavirus strains.
- Understanding rotavirus diversity is essential for global health initiatives.
Purpose of the Study:
- To determine the prevalence and characterize Group A rotavirus strains in children with acute diarrhea in South India.
- To analyze the antigenic and genomic diversity of circulating rotaviruses.
- To provide data for rotavirus vaccine evaluation programs.
Main Methods:
- Monoclonal antibody (MAb)-based ELISA and polyacrylamide gel electrophoresis (PAGE) were used for rotavirus characterization.
- Stool samples were collected from 745 children aged 0-3 years with acute diarrhea.
- Antigenic (group, subgroup, serotype) and genomic (VP7 and VP4 genotype) analyses were performed.
Main Results:
- Rotavirus was detected in 168 out of 745 stool samples (22.6%).
- The predominant strains identified were short electropherotype (E-type), subgroup I (SGI), and serotype G2, found in 66.1% of positive samples.
- High genomic diversity was observed, with 10 different E-types and mixed genotypes including G2 P[4,8] and G1-G2 P[4,8].
Conclusions:
- This study describes the predominant rotavirus strains circulating in South India.
- The findings underscore the significant genomic diversity of rotaviruses in the region.
- Further molecular characterization of rotaviruses is essential for effective vaccine strategies and evaluation.
Background:
Group A rotavirus has been recognized as the major etiologic agent of childhood gastroenteritis in infants and young children worldwide. Rapid progress towards the development of an efficacious rotavirus vaccine has warranted extensive epidemiological studies on rotavirus serotypes that cause severe disease in developing and developed countries and to monitor the emergence of newer and unusual strains in different geographical settings that could represent variants not covered by existing vaccines.
Methods:
In this study, we determined the prevalence of rotavirus infection and characterised group A rotavirus in stool samples by using monoclonal antibody (MAb) based ELISA and polyacrylamide gel electrophoresis (PAGE). Stool samples were collected from 745 children of 0-3 years of age presenting to the hospital with acute diarrhea between March 1995 and August 1999. These were assayed for antigenic (group, subgroup, serotype) and genomic (viral RNA profile and VP7 and VP4 genotype) characterization by ELISA and PAGE.
Results:
Out of 745 stool samples analysed 168 were found to be positive for rotavirus. Among these 118 could be assigned a subgroup (SG), serotype and electropherotype (E-type). The study has evidenced the predominant occurrence of strains with short E-type, SGI and serotype G2 in 66.1% of the samples. The presence of strains representing 10 different E-types and mixed genotype specificities with G2 P[4,8] and G1-G2 P[4,8] has documented the prevailing high genomic diversity of rotaviruses in this geographical area.
Conclusion:
This study has described the predominant strains of rotavirus in south India. There is a need for further detailed studies on the molecular characterization of rotaviruses which would have important implications in vaccine evaluation programmes.
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