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An Integrated Approach for Microprotein Identification and Sequence Analysis
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OCPAT: an online codon-preserved alignment tool for evolutionary genomic analysis of protein coding sequences

Guozhen Liu1, Monica Uddin, Munirul Islam

  • 1Center for Molecular Medicine & Genetics, Wayne State University School of Medicine Detroit, MI 48201, USA. dwildman@med.wayne.edu.

Source Code for Biology and Medicine
|September 20, 2007
PubMed
Summary

This study introduces OCPAT, an online tool for automatic, codon-preserved DNA sequence alignment. OCPAT simplifies evolutionary analysis by maintaining reading frames and optimizing alignments for comparative genomics.

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