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Related Experiment Videos

BioMagResBank.

Eldon L Ulrich1, Hideo Akutsu, Jurgen F Doreleijers

  • 1Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA. elu@bmrb.wisc.edu

Nucleic Acids Research
|November 7, 2007
PubMed
Summary
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The BioMagResBank (BMRB) provides a comprehensive archive of nuclear magnetic resonance (NMR) data for biological molecules. This resource offers free access to spectral parameters, restraints, raw data, and metabolite spectra for researchers worldwide.

Area of Science:

  • Biochemistry and Structural Biology
  • Biophysical Chemistry
  • Metabolomics

Background:

  • The BioMagResBank (BMRB) serves as a crucial repository for experimental and derived data from nuclear magnetic resonance (NMR) spectroscopy.
  • BMRB is an integral partner of the Worldwide Protein Data Bank (wwPDB), facilitating data sharing and integration.

Purpose of the Study:

  • To provide a centralized, publicly accessible archive of NMR spectroscopic data for biological molecules.
  • To support structural biology and metabolomics research by offering diverse NMR datasets and analysis tools.

Main Methods:

  • Data deposition and curation of quantitative NMR spectral parameters (chemical shifts, coupling constants, peak lists), derived data (relaxation parameters, residual dipolar couplings), and NMR restraints.
  • Archiving of time-domain spectral data for spectral assignment and structure determination of biological macromolecules.

Related Experiment Videos

  • Maintenance of a database of 1D and 2D 1H and 13C NMR spectra for over 250 metabolites.

    • Main Results:

    • The BMRB archive contains extensive quantitative NMR parameters, NMR restraints, raw spectral data, and metabolite NMR spectra.
    • Free web access is provided to all data, along with tools for querying and retrieving information.
    • Bulk data download is available via an FTP site, and mirror sites ensure global accessibility and data deposition.

    Conclusions:

    • The BMRB is a vital resource for the scientific community, enabling advanced research in structural biology and metabolomics through comprehensive NMR data.
    • The availability of diverse NMR datasets and user-friendly access tools significantly enhances the utility and impact of the BMRB archive.