Related Experiment Video
Updated: Jul 10, 2026

08:40
Light-driven Molecular Motors on Surfaces for Single Molecular Imaging
Published on: March 13, 2019
Optically sensed, molecular shuttles driven by acid-base chemistry.
Sarah J Vella1, Jorge Tiburcio, Stephen J Loeb
1Department of Chemistry and Biochemistry, University of Windsor, Windsor, Ontario, Canada.
Summary
Researchers developed bistable [2]rotaxane molecular shuttles. These molecular machines exhibit acid-base controlled movement, indicated by color and fluorescence changes.
Area of Science:
- Supramolecular Chemistry
- Materials Science
Background:
- Molecular shuttles are crucial for developing advanced molecular machines.
- Controlling molecular motion is key to designing functional nanomaterials.
Purpose of the Study:
- To synthesize novel bistable [2]rotaxane molecular shuttles.
- To investigate the acid-base controlled actuation of these molecular shuttles.
- To correlate molecular movement with observable optical changes.
Main Methods:
- Synthesis of [2]rotaxane compounds incorporating specific recognition sites.
- Utilizing acid-base stimuli to induce conformational changes and molecular shuttling.
- Spectroscopic analysis (UV-Vis, fluorescence) to monitor changes.
Main Results:
- Successful preparation of bistable [2]rotaxane molecular shuttles.
- Demonstrated acid-base controlled shuttling of the macrocycle along the axle.
- Observed distinct changes in color and/or fluorescence intensity correlating with shuttling events.
Conclusions:
- The synthesized [2]rotaxanes function as effective molecular shuttles.
- Acid-base chemistry provides a viable control mechanism for molecular motion in these systems.
- The optical readouts offer a practical way to monitor the state of the molecular shuttles.
Related Concept Videos
UV–Vis Spectroscopy: Molecular Electronic Transitions
In Ultraviolet–Visible (UV–Vis) spectroscopy, the absorption of electromagnetic radiation is used to probe the electronic structure of molecules. This technique provides insights into molecular electronic transitions, particularly the movement of electrons between different molecular orbitals. Radiation is absorbed if the energy of the electromagnetic radiation passing through the molecule is precisely equal to the energy difference between the excited and ground states. During this process,...
Molecular Spectroscopy: Absorption and Emission
Molecules possess discrete energy levels called quantum states. Unlike atoms, which have simpler energy levels, molecules possess additional rotational and vibrational energy levels. Each energy level is separated by an energy gap, with the gaps between adjacent electronic, vibrational, and rotational levels varying significantly. The three types of energy levels in a diatomic molecule are shown in Figure 1.
Protein Dynamics in Living Cells
Different fluorescence-based techniques are used to study the protein dynamics in living cells. These techniques include FRAP, FRET, and PET.
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
Chemical Shift: Internal References and Solvent Effects
In an NMR sample, precise measurement of the absolute absorption frequencies of nuclei is difficult. A standard internal reference compound is added, and the frequency difference between the reference signal and sample signals is measured.
The internal reference compound generally used in NMR spectroscopy is tetramethylsilane (TMS). TMS is preferred because it is chemically inert, soluble in NMR solvents, and easily removable. Also, the highly shielded methyl protons in TMS yield an intense...
The internal reference compound generally used in NMR spectroscopy is tetramethylsilane (TMS). TMS is preferred because it is chemically inert, soluble in NMR solvents, and easily removable. Also, the highly shielded methyl protons in TMS yield an intense...

