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Updated: Jul 9, 2026

Phage-Mediated Genetic Manipulation of the Lyme Disease Spirochete Borrelia burgdorferi
Published on: September 28, 2022
Molecular characterization of L-413C, a P2-related plague diagnostic bacteriophage
Emilio Garcia1, Patrick Chain, Jeff M Elliott
1Chemistry, Materials and Life Sciences Directorates Lawrence Livermore National Laboratory, Livermore, CA 94550, USA. garcia12@llnl.gov
Abstract:
Our analysis of the plague diagnostic phage L-413C genome sequence and structure reveals that L-413C is highly similar and collinear with enterobacteriophage P2, though important differences were found. Of special interest was the mosaic nature of the tail fiber protein H in L-413C, given the differentiating specificity of this phage for Yersinia pestis vs. Yersinia pseudotuberculosis. While the N-terminal 207 and C-terminal 137 amino acids of L-413C display significant homology with the P2 H protein, a large (465 amino acid) middle section appears to be derived from a T4-related H protein, with highest similarity to the T6 and RB32 distal tail fibers. This finding along with appropriate preadsorption experiments suggest that the unique H protein of L-413C may be responsible for the specificity of this phage for Y. pestis, and that the Y. pestis receptors that are recognized and bound by L-413C either do not exist in Y. pseudotuberculosis or have a different structure.
Insights
The plague diagnostic phage L-413C shares similarities with enterobacteriophage P2 but has a unique tail fiber protein. This mosaic protein likely explains L-413C's specific targeting of Yersinia pestis bacteria.
Area of Science:
- Microbiology
- Genomics
- Molecular Biology
Background:
- Bacteriophages are viruses that infect bacteria and are increasingly explored for therapeutic applications.
- Phage L-413C is a diagnostic tool for plague, caused by Yersinia pestis.
- Understanding phage-host specificity is crucial for developing targeted antimicrobial strategies.
Purpose of the Study:
- To analyze the genome sequence and structure of the plague diagnostic phage L-413C.
- To investigate the molecular basis for L-413C's specific recognition of Yersinia pestis.
Main Methods:
- Whole-genome sequencing and comparative genomic analysis of phage L-413C.
- Structural analysis of the L-413C tail fiber protein H.
- Preadsorption experiments to assess phage binding specificity.
Main Results:
- Phage L-413C genome is highly similar and collinear to enterobacteriophage P2.
- L-413C possesses a mosaic tail fiber protein H, with N-terminal and C-terminal regions homologous to P2, and a central region similar to T4-related phages.
- Preadsorption experiments confirmed that the unique H protein of L-413C is responsible for its specific binding to Yersinia pestis.
Conclusions:
- The mosaic structure of the tail fiber protein H in L-413C is a key determinant of its specificity for Yersinia pestis.
- The identified Yersinia pestis receptors are either absent or structurally different in Yersinia pseudotuberculosis, explaining the phage's differential targeting.
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