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Related Experiment Video

Updated: Jul 9, 2026

A Flow Cytometry-Based Cell Surface Protein Binding Assay for Assessing Selectivity and Specificity of an Anticancer Aptamer
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A Flow Cytometry-Based Cell Surface Protein Binding Assay for Assessing Selectivity and Specificity of an Anticancer Aptamer

Published on: September 13, 2022

Cell-specific internalization study of an aptamer from whole cell selection.

Zeyu Xiao1, Dihua Shangguan, Zehui Cao

  • 1Center for Research at the Bio/Nano Interface, Department of Chemistry, Shands Cancer Center and UF Genetics Institute, McKnight Brain Institute, University of Florida, Gainesville, FL 32611-7200, USA.

Chemistry (Weinheim an Der Bergstrasse, Germany)
|December 20, 2007
PubMed
Summary

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A new DNA aptamer, sgc8, is efficiently internalized by lymphoblastic leukemia cells. This aptamer shows promise for targeted intracellular delivery without observed cytotoxicity, opening new avenues for aptamer applications.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Cell Biology

Background:

  • Nucleic acid aptamers are valuable for molecular recognition but face challenges in cellular internalization for functional studies and intracellular delivery.
  • Limited availability of cell-specific aptamers and understanding of their in vivo functions hinder their broader application.
  • Most aptamers require external assistance for cellular uptake, unlike small molecules.

Purpose of the Study:

  • To investigate the cellular internalization and intracellular fate of a newly developed, cell-specific DNA aptamer, sgc8.
  • To evaluate the potential of sgc8 for targeted intracellular delivery into specific cell types.
  • To compare the internalization kinetics of sgc8 with an antibody targeting the same cell surface protein.

Main Methods:

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Last Updated: Jul 9, 2026

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  • Selection of a cell-specific DNA aptamer (sgc8) using a novel cell-SELEX (Systematic Evolution of Ligands by Exponential Enrichment) process.
  • Studying the cellular internalization and subcellular localization of sgc8 in lymphoblastic leukemia cells.
  • Comparing the internalization of sgc8 with an antibody against PTK7 (Human protein tyrosine kinase-7) on living cells.
  • Assessing the cytotoxicity of sgc8 on cell viability.

Main Results:

  • The DNA aptamer sgc8 was efficiently and specifically internalized into lymphoblastic leukemia cells.
  • Internalized sgc8 aptamers were primarily localized within endosomes.
  • sgc8 demonstrated comparable internalization kinetics to an anti-PTK7 antibody and exhibited no cytotoxicity.
  • The cell-SELEX process successfully generated a cell-specific aptamer with potential for intracellular delivery.

Conclusions:

  • The cell-specific DNA aptamer sgc8 is efficiently internalized into target cells and resides in endosomes.
  • sgc8 is a promising candidate for cell-type specific intracellular delivery applications.
  • This study highlights the potential of aptamers selected via cell-SELEX for advanced biological and therapeutic applications.