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Updated: Jul 8, 2026

Measurement of Factor V Activity in Human Plasma Using a Microplate Coagulation Assay
Published on: September 9, 2012
Effects of prothrombin on the individual activated protein C-mediated cleavages of coagulation factor Va
Sinh Tran1, Eva Norstrøm, Björn Dahlbäck
1Department of Laboratory Medicine, Clinical Chemistry, Lund University, The Wallenberg Laboratory, University Hospital, Malmö, SE-205 02 Malmö, Sweden.
Insights
Prothrombin inhibits activated protein C (APC) from inactivating factor Va (FVa) by affecting both major cleavage sites. This protective effect, crucial for FVa function in the prothrombinase complex, is lost upon prothrombin activation.
Area of Science:
- Biochemistry
- Hematology
- Molecular Biology
Background:
- Factor Va (FVa) is a critical coagulation cofactor.
- Activated protein C (APC) inactivates FVa through specific proteolytic cleavages.
- Inhibition of APC-mediated FVa inactivation by factor Xa (FXa) and prothrombin is known, but prothrombin's precise mechanism is unclear.
Purpose of the Study:
- To investigate the effect of prothrombin on the individual APC cleavage sites in FVa.
- To elucidate the mechanism by which prothrombin inhibits APC-mediated FVa inactivation.
Main Methods:
- Utilized recombinant FV variants (FV:R506Q/R679Q and FV:R306Q/R679Q).
- Employed a prothrombinase-based FVa assay to monitor APC-mediated FVa inhibition.
- Calculated apparent first-order rate constants for cleavage sites in the presence and absence of prothrombin.
- Analyzed proteolytic products using Western blots.
Main Results:
- Prothrombin significantly impaired APC-mediated cleavages at both Arg306 and Arg506 sites of FVa.
- Prothrombin exhibited dose-dependent inhibition, with near-complete inhibition at 3 µM.
- The inhibitory activity of prothrombin was lost after its cleavage by thrombin.
- Prothrombin's inhibitory effect was more pronounced at the Arg306 site in the presence of protein S.
Conclusions:
- Prothrombin protects FVa from APC inactivation by hindering both Arg306 and Arg506 cleavages.
- Prothrombin's inhibition involves impaired APC function and, in the presence of protein S, decreased APC cofactor function.
- FVa is protected within the prothrombinase complex by FXa and prothrombin, with this protection being alleviated upon prothrombin activation.
Abstract:
The factor Va (FVa) inactivation by activated protein C (APC), mediated by cleavages at Arg306 and Arg506 in FVa, is inhibited by both factor Xa (FXa) and prothrombin. Although FXa is known to specifically inhibit the Arg506 cleavage, the effect of prothrombin has not been confined to one cleavage site. We used recombinant FV variants, FV:R506Q/R679Q and FV:R306Q/R679Q, to investigate the effect of prothrombin on the individual cleavage sites. The APC-mediated FVa inhibition was monitored by a prothrombinase-based FVa assay, and apparent first order rate constants were calculated for each of the cleavage sites both in the presence and absence of prothrombin. Prothrombin impaired cleavages at both Arg306 and Arg506 and the inhibition correlated with a delayed appearance of proteolytic products on Western blots. Almost complete inhibition was obtained at around 3 microm prothrombin, whereas half-maximal inhibition was obtained at 0.7 microm prothrombin. After cleavage of prothrombin by thrombin, the inhibitory activity was lost. The inhibitory effect of prothrombin on APC-mediated inhibition of FVa was seen both in the presence and absence of protein S, but in particular for the Arg306 sites, it was more pronounced in the presence of protein S. Thus, prothrombin inhibition of APC inactivation of FVa appears to be due to both impaired APC function and decreased APC cofactor function of protein S. In conclusion, FVa, being part of the prothrombinase complex, is protected from APC by both FXa and prothrombin. Release of products of prothrombin activation from the prothrombinase complex would alleviate the protection, allowing APC-mediated inactivation of FVa.
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