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Laboratory Techniques Used to Maintain and Differentiate Biotypes of Vibrio cholerae Clinical and Environmental Isolates
Published on: May 30, 2017
Application of DNA-based methods in typing Vibrio cholerae strains
Durg V Singh1, Harapriya Mohapatra
1Institute of Life Sciences, Nalco Square, Bhubaneswar-751023, India. singhdv@ils.res.in
Future Microbiology
|January 31, 2008
Summary
DNA-based genotyping methods are essential for understanding Vibrio cholerae. These techniques reveal strain subtypes, infection origins, and virulence, aiding in disease control and environmental monitoring.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Molecular biology techniques analyzing microbial DNA are fundamental in biological research.
- Genotyping provides insights into organism subtypes, infection sources, and virulence.
- These methods are crucial for monitoring vaccination programs and understanding pathogen evolution.
Purpose of the Study:
- To review DNA-based techniques for the molecular analysis of Vibrio cholerae.
- To discuss the applications of these techniques in understanding V. cholerae.
- To explore future directions in V. cholerae molecular epidemiology.
Main Methods:
- Pulsed-field gel electrophoresis (PFGE)
- Ribotyping
- CTX typing
- Amplified fragment length polymorphism (AFLP)
- Enterobacterial Intergenic Consensus Sequence-PCR (ERIC-PCR)
- Multilocus Sequence Typing (MLST)
- Microarray methods
Main Results:
- These methods determine genetic changes in toxigenic and nontoxigenic Vibrio cholerae strains.
- They help identify the origin of infections and relationships between clinical and environmental strains.
- Simultaneous detection of CTX prophage copy number/types and persistence genes is possible.
Conclusions:
- DNA-based techniques are vital for comprehensive molecular analysis of V. cholerae.
- Applications include tracking strain origins, virulence, and environmental persistence.
- Continued development of these methods will enhance our understanding and control of cholera.
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