Caloric restriction counteracts age-dependent changes in prolyl-4-hydroxylase domain (PHD) 3 expression
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Updated: Jul 7, 2026

Quantifying Tissue-Specific Proteostatic Decline in Caenorhabditis elegans
Published on: September 7, 2021
Susanne Rohrbach1, Sabine Teichert, Bernd Niemann
1Institute of Pathophysiology, Martin-Luther University Halle-Wittenberg, Ernst-Grube-Str. 40, 06112 Halle, Germany.
Insights
Caloric restriction lowers elevated prolyl-4-hydroxylase domain (PHD) 3 expression linked to aging. This finding reveals how dietary changes impact hypoxia-mediated gene expression and potentially aging processes.
Area of Science:
- Biochemistry
- Aging Research
- Molecular Biology
Background:
- Prolyl-4-hydroxylase domain (PHD) 3 expression increases with age in the heart.
- PHDs regulate cellular response to hypoxia by controlling hypoxia-inducible factor (HIF) stability.
- HIF-mediated pathways are implicated in anti-aging effects.
Purpose of the Study:
- To investigate the tissue-specific expression of PHD3 in aging.
- To determine the effect of caloric restriction on PHD3 expression.
- To explore the relationship between PHD3, HIF, and aging.
Main Methods:
- Quantitative analysis of PHD3, PHD1, and PHD2 expression in rat tissues (heart, skeletal muscle, liver).
- Implementation of a 40% caloric restriction diet for 6 months.
- Measurement of HIF-target gene macrophage migration inhibitory factor (MIF) expression.
Main Results:
- Elevated PHD3 expression was observed not only in the heart but also in rat skeletal muscle and liver with age.
- Caloric restriction significantly reduced elevated PHD3 expression in all three tissues.
- Age-associated increases in PHD3 inversely correlated with decreased expression of the HIF-target gene MIF.
Conclusions:
- PHD3 upregulation is a general aging response across multiple tissues, not limited to the heart.
- Caloric restriction effectively counteracts age-associated PHD3 elevation.
- PHD3 plays a role in mediating the effects of caloric restriction on hypoxia-responsive gene expression and potentially aging.
Abstract:
Caloric restriction remains the most reproducible measure known to extend life span or diminish age-associated changes. Previously, we have described an elevated expression of the prolyl-4-hydroxylase domain (PHD) 3 with increasing age in mouse and human heart. PHDs modulate the cellular response towards hypoxia by regulating the stability of the alpha-subunit of the transcriptional activator hypoxia inducible factor (HIF). In the present study we demonstrate that elevated PHD3, but not PHD1 or PHD2, expression is not restricted to the heart but does also occur in rat skeletal muscle and liver. Elevated expression of PHD3 is counteracted by a decrease in caloric intake (40% caloric restriction applied for 6 months) in all three tissues. Age-associated changes in PHD3 expression inversely correlated with the expression of the HIF-target gene macrophage migration inhibitory factor (MIF), which has been previously described to be involved in cellular HIF-mediated anti-ageing effects. These data give insight into the molecular consequences of caloric restriction, which influences hypoxia-mediated gene expression via PHD3.
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