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Related Concept Videos

Stem Cell Niche01:26

Stem Cell Niche

The stem cell niche is the dynamic microenvironment where stem cells reside. Inside these niches, the cells may remain undifferentiated, undergo high self-renewal, or become lineage-specific progenitors. Stem cells coexist with other niche cells, such as stromal cells. They also interact closely with the ECM. Cell-cell and cell-matrix communication occur via adhesion molecules or soluble factors that signal the stem cells and determine their fate. Stromal cells also provide survival signals to...
Regulation of Hematopoietic Stem Cells01:01

Regulation of Hematopoietic Stem Cells

All blood and immune cells are produced from the multipotent hematopoietic stem cells (HSCs) by the process of hematopoiesis. However, they all have a limited life span. In addition, many are depleted in immune surveillance or combatting an injury or infection. This makes blood one of the most regenerative tissues. Hematopoiesis helps replenish these blood and immune cells, restoring the body's normal functioning. However, overproduction of blood and immune cells can make them cancerous or...
Diversity in Cell Signaling Responses01:22

Diversity in Cell Signaling Responses

The physiological function of a cell and cellular communication are outcomes of a range of extrinsic signals, intracellular signaling pathways, and cellular responses. No two cell types express the same repertoire of signaling components. Receptors are highly selective for their cognate ligands, but once activated, they can alter multiple cellular processes such as DNA transcription, protein synthesis, and metabolic activity. 
Graded and Abrupt Responses
Some signaling systems generate...
Lineage Commitment01:21

Lineage Commitment

Commitment is the  process whereby stem cells:
Role Of Notch Signalling In Intestinal Stem Cell Renewal01:12

Role Of Notch Signalling In Intestinal Stem Cell Renewal

Notch signaling was first discovered in Drosophila melanogaster, where it is involved in cell lineage differentiation. Notch signaling regulates the maintenance and differentiation of intestinal stem cells or ISCs by controlling the expression of atonal homolog 1 or Atoh1. Atoh1 directs cells to differentiate into secretory cells.
Direct cell-to-cell contact is needed for the activation of Notch signaling. The signal is initiated when a notch ligand binds to a receptor on an adjacent cell, also...
Combinatorial Gene Control02:33

Combinatorial Gene Control

Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...

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Related Experiment Video

Updated: Jul 7, 2026

Patterning of Embryonic Stem Cells Using the Bio Flip Chip
05:25

Patterning of Embryonic Stem Cells Using the Bio Flip Chip

Published on: October 1, 2007

Combinatorial signaling microenvironments for studying stem cell fate.

Christopher J Flaim1, Dayu Teng, Shu Chien

  • 1Department of Bioengineering and Medicine, University of California-San Diego, La Jolla, CA 92093-0412, USA.

Stem Cells and Development
|February 15, 2008
PubMed
Summary
This summary is machine-generated.

This study introduces a new platform to test how extracellular matrix (ECM) and growth factors influence stem cell fate. The technology reveals complex signaling interactions crucial for understanding stem cell development.

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A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations
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Stencil Micropatterning of Human Pluripotent Stem Cells for Probing Spatial Organization of Differentiation Fates
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Last Updated: Jul 7, 2026

Patterning of Embryonic Stem Cells Using the Bio Flip Chip
05:25

Patterning of Embryonic Stem Cells Using the Bio Flip Chip

Published on: October 1, 2007

A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations
09:34

A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations

Published on: October 25, 2018

Stencil Micropatterning of Human Pluripotent Stem Cells for Probing Spatial Organization of Differentiation Fates
08:07

Stencil Micropatterning of Human Pluripotent Stem Cells for Probing Spatial Organization of Differentiation Fates

Published on: June 17, 2016

Area of Science:

  • Stem cell biology
  • Biotechnology
  • Systems biology

Background:

  • Extracellular matrix (ECM) and growth factors intricately regulate stem cell fate.
  • Reductionist approaches analyzing single components fail to predict responses to complex signaling environments.
  • Understanding these interactions is key to advancing stem cell therapies and developmental biology.

Purpose of the Study:

  • To develop a high-throughput technology platform for probing ECM-growth factor interactions on stem cell fate.
  • To enable systematic investigation of complex signaling networks influencing stem cell differentiation.
  • To advance the 'systems biology' of stem cells.

Main Methods:

  • A multiwell microarray platform was designed for 1200 simultaneous experiments.
  • Mixtures of ECM proteins (fibronectin, laminin, collagen I, III, IV) and soluble growth factors (wnt3a, activin A, BMP-4, FGF-4) were arrayed.
  • Embryonic stem (ES) cell differentiation was monitored via cardiac lineage reporter (MHC alpha-GFP) and DNA content using a confocal microarray scanner.

Main Results:

  • The platform successfully characterized protein deposition, reporter expression, and DNA content.
  • Observed growth factor effects on ES cell growth and differentiation align with existing literature.
  • Preliminary data suggest interactive signaling between ECM components and growth factors.

Conclusions:

  • The developed microarray platform enables comprehensive analysis of ECM-growth factor interactions on stem cell fate.
  • This versatile technology facilitates the study of complex signaling networks.
  • It represents a significant step towards a systems biology approach for stem cells.