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Membrane Transport Processes Analyzed by a Highly Parallel Nanopore Chip System at Single Protein Resolution
Published on: August 16, 2016
Probing structure-function relationships and gating mechanisms in the CorA Mg2+ transport system
Jian Payandeh1, Canhui Li, Mohabir Ramjeesingh
1Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 1L7, Canada. payandeh@uhnres.utoronto.ca
Engineering the Thermotoga maritima CorA (TmCorA) Mg(2+) transporter reveals gating mechanisms. Structure-guided mutations identified allosteric regulation and a hydrophobic gate, impacting ion transport and channel function.
Area of Science:
- Structural Biology
- Biophysics
- Molecular Biology
Background:
- CorA Mg(2+) transport proteins feature long ion pores with proposed gating mechanisms at intracellular and periplasmic ends.
- Understanding ion channel and transporter gating is crucial for molecular mechanism elucidation.
Purpose of the Study:
- To probe structure-function relationships in Thermotoga maritima CorA (TmCorA) using a structure-guided engineering approach.
- To investigate the gating mechanisms of the TmCorA Mg(2+) transporter.
Main Methods:
- Structure-guided protein engineering of TmCorA.
- Site-directed mutagenesis to alter pore-lining helices and loops.
- Functional assays to assess Mg(2+) transport and selectivity.
Main Results:
- The intracellular funnel domain acts as an allosteric regulatory module, engineerable for activation or closure.
- A periplasmic gate, involving a proline-induced kink, was identified, with helix-straightening mutations causing gain-of-function.
- Mutations at the narrowest pore constriction confirmed a hydrophobic gate essential for Mg(2+) flux.
- Conserved acidic residues in the periplasmic loop are not critical for function but may aid folding.
Conclusions:
- TmCorA gating involves both allosteric regulation and specific gate structures, including a hydrophobic barrier.
- The findings extend the gating model for the CorA-Alr1-Mrs2 superfamily.
- Identified gating features have broader implications for understanding diverse ion channel and transporter families.
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