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Published on: December 23, 2022
Emergence of CC17 Enterococcus faecium: from commensal to hospital-adapted pathogen
Janetta Top1, Rob Willems, Marc Bonten
1Department of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands. j.top@umcutrecht.nl
Abstract:
For many years, Enterococcus faecium was considered to be a commensal of the digestive tract, which only sporadically caused opportunistic infections in severely ill patients. Over the last two decades, vancomycin-resistant E. faecium (VREF) has emerged worldwide as an important cause of nosocomial infections, especially in immunocompromised patients. The global Vancomycin-resistant enterococci (VRE) epidemic was preceded by the emergence of ampicillin-resistant E. faecium (AREfm) in the United States in the early 1980s, followed by the rapid emergence of VRE in the 1990s. A similar increase of VRE may occur in countries with still low levels of VRE in hospitals (such as The Netherlands), but increasing incidence of AREfm infections. Molecular epidemiological studies of both human- and animal-derived E. faecium isolates using multilocus sequence typing revealed the existence of host-specific genogroups, including a specific genetic lineage designated CC17, associated with hospital-related isolates. These strains were characterized by ampicillin and quinolone resistance. In addition, the majority of these CC17 isolates contain over hundred hospital-clade-specific genes, including mobile elements, phage genes and plasmid sequences, hypothetical and membrane proteins and antibiotic and regulatory genes and a putative pathogenicity island including the esp gene.
Insights
Ampicillin-resistant Enterococcus faecium (AREfm) strains, particularly the CC17 lineage, are increasingly causing hospital infections. These VREF strains possess specific genes linked to antibiotic resistance and pathogenicity, posing a growing threat.
Area of Science:
- Microbiology
- Epidemiology
- Genetics
Background:
- Enterococcus faecium, once a commensal, now causes significant nosocomial infections, especially vancomycin-resistant E. faecium (VREF).
- The rise of VREF globally followed the emergence of ampicillin-resistant E. faecium (AREfm) in the US.
- Hospitals with low VRE levels may face similar increases, alongside rising AREfm infections.
Purpose of the Study:
- To investigate the molecular epidemiology of E. faecium isolates.
- To identify genetic characteristics associated with hospital-acquired infections.
- To understand the emergence and spread of resistant strains.
Main Methods:
- Multilocus sequence typing (MLST) of human and animal E. faecium isolates.
- Comparative genomic analysis of different E. faecium lineages.
- Identification of specific genes and genetic elements in hospital-associated strains.
Main Results:
- MLST revealed host-specific genogroups, including CC17, linked to hospital isolates.
- CC17 strains exhibit resistance to ampicillin and quinolones.
- CC17 isolates possess over a hundred hospital-clade-specific genes, including mobile elements, phage genes, and a pathogenicity island with the esp gene.
Conclusions:
- The CC17 lineage represents a distinct genetic group of E. faecium associated with hospital environments.
- These hospital-adapted strains carry genetic determinants for antibiotic resistance and potential virulence factors.
- Understanding these genetic traits is crucial for combating VREF infections in healthcare settings.
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