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GrainGenes.

Helen O'Sullivan1

  • 1ACPFG Australian Centre for Plant Functional Genomics, University of Adelaide, Urrbrae, Australia and Department of Biological Sciences, University of Bristol, Bristol, UK.

Methods in Molecular Biology (Clifton, N.J.)
|February 22, 2008
PubMed
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GrainGenes is a comprehensive online resource for Triticeae species and oat research. It provides a searchable database of genetic information and serves as a platform for scientific communication and discussion.

Area of Science:

  • Agricultural Science
  • Genetics
  • Bioinformatics

Background:

  • Researchers require extensive genetic and phenotypic data for Triticeae species and oat.
  • Existing data resources may be fragmented or difficult to access.

Purpose of the Study:

  • To describe the GrainGenes website and its integrated database.
  • To highlight the diverse data types and access methods available to researchers.

Main Methods:

  • The GrainGenes database integrates genetic maps, genes, alleles, markers, phenotypic data, and quantitative trait loci (QTL).
  • Data can be accessed via text searches, browsing, Boolean queries, MySQL commands, and curator-created queries.
  • The website also functions as an informative platform for project communication and discussion.

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Main Results:

  • GrainGenes offers a centralized repository of critical information for Triticeae and oat researchers.
  • Multiple query options ensure flexible and efficient data retrieval.
  • The platform facilitates scientific collaboration and knowledge sharing.

Conclusions:

  • GrainGenes is an invaluable resource for advancing research on Triticeae species and oat.
  • Its comprehensive data and accessibility features streamline genetic and phenotypic studies.
  • The site promotes scientific discourse and accelerates discovery in the field.