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Updated: Jul 7, 2026

An In Vitro Protocol for Evaluating MicroRNA Levels, Functions, and Associated Target Genes in Tumor Cells
Published on: May 21, 2019
MicroRNA-137 targets microphthalmia-associated transcription factor in melanoma cell lines
Lynne T Bemis1, Robert Chen, Carol M Amato
1Division of Medical Oncology, University of Colorado Denver School of Medicine, Aurora, CO 80045, USA.
Abstract:
Micropthalmia-associated transcription factor (MITF) is the master regulator of melanocyte development, survival, and function. Frequent alteration in the expression of MITF is detected in melanoma, but the mechanism(s) underlying the alteration in expression have not been completely determined. In these studies, we have identified microRNA-137 (miR-137) as a regulator of MITF expression. The genomic locus of miR-137 at chromosome 1p22 places it in a region of the human genome previously determined to harbor an allele for melanoma susceptibility. Here, we show that expression of mature miR-137 in melanoma cell lines down-regulates MITF expression. Further, we have identified a 15-bp variable nucleotide tandem repeat located just 5' to the pre-miR-137 sequence, which alters the processing and function of miR-137 in melanoma cell lines.
Insights
MicroRNA-137 (miR-137) regulates Micropthalmia-associated transcription factor (MITF) expression in melanoma. A variable tandem repeat near miR-137 affects its processing and function, impacting melanoma development.
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- Micropthalmia-associated transcription factor (MITF) is crucial for melanocyte development and function.
- Altered MITF expression is common in melanoma, but regulatory mechanisms remain unclear.
Purpose of the Study:
- To identify regulators of MITF expression in melanoma.
- To investigate the role of microRNA-137 (miR-137) in MITF regulation.
Main Methods:
- Analysis of miR-137 expression in melanoma cell lines.
- Investigating the effect of miR-137 on MITF levels.
- Characterizing a variable nucleotide tandem repeat upstream of pre-miR-137.
Main Results:
- miR-137 was identified as a regulator that down-regulates MITF expression.
- The miR-137 locus at chromosome 1p22 is linked to melanoma susceptibility.
- A 15-bp variable tandem repeat influences miR-137 processing and function.
Conclusions:
- miR-137 is a novel regulator of MITF in melanoma.
- Genetic variations within the miR-137 locus may contribute to melanoma susceptibility.
- The variable tandem repeat represents a potential mechanism for altered miR-137 function in melanoma.
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