Related Experiment Video
Updated: Jul 6, 2026

07:55
An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA
Published on: February 17, 2023
Biosensors for RNA aptamers-protein interaction
Sara Tombelli1, Maria Minunni, Marco Mascini
1Dipartimento di Chimica, Università degli Studi di Firenze, Sesto Fiorentino, Italy.
Methods in Molecular Biology (Clifton, N.J.)
|March 29, 2008
Summary
RNA aptamers offer a powerful alternative to antibodies for creating sensitive biosensors. This study details methods for immobilizing aptamers on piezoelectric and SPR devices for protein detection.
Area of Science:
- Biochemistry
- Analytical Chemistry
- Materials Science
Background:
- Antibodies have traditionally served as biorecognition elements in analytical devices.
- Aptamers, particularly RNA aptamers, are emerging as viable alternatives due to their specificity for various proteins.
- Aptasensors leverage aptamers for highly specific molecular recognition.
Purpose of the Study:
- To demonstrate the use of RNA aptamers as biorecognition elements in biosensor development.
- To outline procedures for immobilizing aptamers onto transducer surfaces.
- To show methods for monitoring aptamer-protein interactions in real-time.
Main Methods:
- Coupling RNA aptamers to piezoelectric quartz crystal transducers.
- Utilizing surface plasmon resonance (SPR) devices as transducers for aptamer immobilization.
- Developing protocols for fixing aptamers onto sensor surfaces.
- Establishing methods for detecting target protein interactions with immobilized aptamers.
Main Results:
- Successful immobilization of RNA aptamers onto piezoelectric and SPR transducers.
- Demonstrated ability of aptamers to specifically recognize and bind target proteins.
- Established procedures for monitoring binding events using the described transducer platforms.
Conclusions:
- RNA aptamers are effective biorecognition elements for biosensor applications.
- The presented methods enable the development of specific aptasensors.
- This work provides a foundation for advanced analytical devices utilizing aptamer technology.

