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Methods to Discover Alternative Promoter Usage and Transcriptional Regulation of Murine Bcrp1
Published on: May 27, 2016
TBL1 and TBLR1 phosphorylation on regulated gene promoters overcomes dual CtBP and NCoR/SMRT transcriptional
Valentina Perissi1, Claudio Scafoglio, Jie Zhang
1Howard Hughes Medical Institute, School of Medicine, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA.
Abstract:
A key strategy to achieve regulated gene expression in higher eukaryotes is to prevent illegitimate signal-independent activation by imposing robust control on the dismissal of corepressors. Here, we report that many signaling pathways, including Notch, NF-kappaB, and nuclear receptor ligands, are subjected to a dual-repression "checkpoint" based on distinct corepressor complexes. Gene activation requires the release of both CtBP1/2- and NCoR/SMRT-dependent repression, through the coordinate action of two highly related exchange factors, the transducer beta-like proteins TBL1 and TBLR1, that license ubiquitylation and degradation of CtBP1/2 and NCoR/SMRT, respectively. Intriguingly, their function and differential specificity reside in only five specific Ser/Thr phosphorylation site differences, regulated by direct phosphorylation at the level of the promoter, as exemplified by the role of PKCdelta in TBLR1-dependent dismissal of NCoR. Thus, our data reveal a strategy of dual-factor repression checkpoints, in which dedicated exchange factors serve as sensors for signal-specific dismissal of distinct corepressors, with specificity imposed by upstream signaling pathways.
Insights
Gene expression regulation in eukaryotes involves a dual-repression checkpoint. Transducer beta-like proteins TBL1 and TBLR1 release corepressors CtBP1/2 and NCoR/SMRT, enabling gene activation through specific phosphorylation.
Area of Science:
- Molecular Biology
- Gene Regulation
- Epigenetics
Background:
- Regulated gene expression in eukaryotes relies on controlling corepressor dismissal.
- Signal-independent activation must be prevented for precise gene control.
Purpose of the Study:
- To investigate the mechanism of dual-repression checkpoints in eukaryotic gene expression.
- To identify the factors responsible for releasing distinct corepressor complexes.
Main Methods:
- Analysis of signaling pathways including Notch, NF-kappaB, and nuclear receptor ligands.
- Investigated the roles of transducer beta-like proteins (TBL1 and TBLR1) in corepressor release.
- Examined the impact of specific phosphorylation sites on protein function.
Main Results:
- Many signaling pathways utilize a dual-repression checkpoint involving CtBP1/2 and NCoR/SMRT corepressors.
- TBL1 and TBLR1 act as exchange factors, facilitating ubiquitylation and degradation of CtBP1/2 and NCoR/SMRT, respectively.
- Differential specificity of TBL1/TBLR1 is determined by five Ser/Thr phosphorylation site differences, regulated by upstream signaling.
Conclusions:
- Dual-factor repression checkpoints ensure regulated gene expression by controlling distinct corepressor complexes.
- TBL1 and TBLR1 function as signal-specific sensors for corepressor dismissal.
- Upstream signaling pathways impose specificity on corepressor release through phosphorylation of exchange factors.
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