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Related Concept Videos

Role of Ephrin-Eph Signalling in Intestinal Stem Cell Renewal01:22

Role of Ephrin-Eph Signalling in Intestinal Stem Cell Renewal

Erythropoietin-producing hepatocellular carcinoma receptor (Eph) and its ligand, Eph receptor-interacting protein (Ephrin) were first discovered in the human carcinoma cell line, hence the name. Ephrin-Eph interaction guides cells to reach their appropriate location in adult tissues. They also play an essential role in the immune system by helping in immune cell migration, adhesion, and activation. Based on their structure and function, Eph is divided into two classes — EphA and EphB.
Role Of Notch Signalling In Intestinal Stem Cell Renewal01:12

Role Of Notch Signalling In Intestinal Stem Cell Renewal

Notch signaling was first discovered in Drosophila melanogaster, where it is involved in cell lineage differentiation. Notch signaling regulates the maintenance and differentiation of intestinal stem cells or ISCs by controlling the expression of atonal homolog 1 or Atoh1. Atoh1 directs cells to differentiate into secretory cells.
Direct cell-to-cell contact is needed for the activation of Notch signaling. The signal is initiated when a notch ligand binds to a receptor on an adjacent cell, also...
Gastrulation01:56

Gastrulation

Gastrulation establishes the three primary tissues of an embryo: the ectoderm, mesoderm, and endoderm. This developmental process relies on a series of intricate cellular movements, which in humans transforms a flat, “bilaminar disc” composed of two cell sheets into a three-tiered structure. In the resulting embryo, the endoderm serves as the bottom layer, and stacked directly above it is the intermediate mesoderm, and then the uppermost ectoderm. Respectively, these tissue strata will form...
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The intestinal epithelial lining rapidly renews every 4 to 5 days. The renewal is facilitated by intestinal stem cells (ISCs) located at the base of the crypt– a gland located at the bottom of each villus. ISCs divide asymmetrically to form new stem cells and progenitor daughter cells. The daughter cells are called transit-amplifying (TA) cells which move upwards along the crypt and either differentiate into absorptive cells– the enterocytes or secretory cells– including the goblet,...
Master Transcription Regulators02:23

Master Transcription Regulators

Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
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Non-Canonical Wnt Signaling Pathways

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Related Experiment Video

Updated: Jul 6, 2026

The C. elegans Intestine As a Model for Intercellular Lumen Morphogenesis and In Vivo Polarized Membrane Biogenesis at the Single-cell Level: Labeling by Antibody Staining, RNAi Loss-of-function Analysis and Imaging
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The C. elegans Intestine As a Model for Intercellular Lumen Morphogenesis and In Vivo Polarized Membrane Biogenesis at the Single-cell Level: Labeling by Antibody Staining, RNAi Loss-of-function Analysis and Imaging

Published on: October 3, 2017

Multiple roles for Med12 in vertebrate endoderm development.

Chong Hyun Shin1, Won-Suk Chung, Sung-Kook Hong

  • 1Department of Biochemistry and Biophysics, Liver Center, University of California, San Francisco, CA 94158, USA. chong.shin@ucsf.edu

Developmental Biology
|April 9, 2008
PubMed
Summary

Mutations in the shiri gene disrupt zebrafish endoderm development, affecting liver and pancreas formation. This is partly due to reduced expression of the hairy-related gene, her5, highlighting its role in organogenesis.

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Generation of Naïve Blastoderm Explants from Zebrafish Embryos
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Generation of Naïve Blastoderm Explants from Zebrafish Embryos

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Last Updated: Jul 6, 2026

The C. elegans Intestine As a Model for Intercellular Lumen Morphogenesis and In Vivo Polarized Membrane Biogenesis at the Single-cell Level: Labeling by Antibody Staining, RNAi Loss-of-function Analysis and Imaging
12:15

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Mouse Fetal Whole Intestine Culture System for Ex Vivo Manipulation of Signaling Pathways and Three-dimensional Live Imaging of Villus Development
06:46

Mouse Fetal Whole Intestine Culture System for Ex Vivo Manipulation of Signaling Pathways and Three-dimensional Live Imaging of Villus Development

Published on: September 4, 2014

Generation of Naïve Blastoderm Explants from Zebrafish Embryos
07:21

Generation of Naïve Blastoderm Explants from Zebrafish Embryos

Published on: July 30, 2021

Area of Science:

  • Developmental Biology
  • Genetics
  • Molecular Biology

Background:

  • The endoderm forms the digestive tract and associated organs like the liver and pancreas.
  • Understanding endodermal cell differentiation into specific cell types is crucial.

Purpose of the Study:

  • To investigate genes regulating endodermal organ development using zebrafish.
  • To identify the molecular mechanisms underlying endodermal organ defects.

Main Methods:

  • Forward genetic screen in zebrafish to identify mutations affecting endodermal organ development.
  • Phenotypic analysis of mutant embryos, including gene expression studies (her5).
  • Positional cloning to identify the mutated gene (shiri) and molecular characterization of its function.

Main Results:

  • Mutations at the shiri locus cause defects in liver and pancreas development in zebrafish.
  • These defects are linked to reduced endodermal expression of her5 during gastrulation.
  • shiri encodes Med12, a subunit of the transcriptional Mediator complex.
  • Med12 influences Casanova/Sox32's ability to induce sox17 expression.

Conclusions:

  • Med12 plays a significant role in vertebrate endoderm development.
  • her5 is important for the development of endodermal organs like the liver and pancreas.
  • Defects in Med12 may explain craniofacial and digestive defects in human syndromes.