Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Phase Contrast and Differential Interference Contrast Microscopy01:26

Phase Contrast and Differential Interference Contrast Microscopy

Phase-Contrast Microscopes
In-phase-contrast microscopes, interference between light directly passing through a cell and light refracted by cellular components is used to create high-contrast, high-resolution images without staining. It is the oldest and simplest type of microscope that creates an image by altering the wavelengths of light rays passing through the specimen. Altered wavelength paths are created using an annular stop in the condenser. The annular stop produces a hollow cone of...
Imaging Biological Samples with Optical Microscopy01:18

Imaging Biological Samples with Optical Microscopy

Optical microscopy uses optic principles to provide detailed images of samples. Antonie van Leeuwenhoek designed the first compound optical microscope in the 17th century to visualize blood cells, bacteria, and yeast cells. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes with enhanced magnification and resolution.
In optical microscopy, the specimen to be viewed is placed on a glass slide and clipped on the stage...
Three-Dimensional Microscopy in Microbiology01:28

Three-Dimensional Microscopy in Microbiology

Three-dimensional imaging techniques are essential in cell biology, allowing researchers to visualize intricate cellular structures with high resolution. Two prominent methods, Differential Interference Contrast Microscopy (DIC) and Confocal Scanning Laser Microscopy (CSLM), provide distinct advantages for imaging live and thick specimens, respectively.Differential Interference Contrast MicroscopyDIC microscopy enhances contrast in transparent, unstained samples by converting phase...
Super-resolution Fluorescence Microscopy01:37

Super-resolution Fluorescence Microscopy

Super-resolution fluorescence microscopy (SRFM) provides a better resolution than conventional fluorescence microscopy by reducing the point spread function (PSF). PSF is the light intensity distribution from a point that causes it to appear blurred. Due to PSF, each fluorescing point appears bigger than its actual size, and it is the PSF interference of nearby fluorophores that causes the blurred image. Various approaches to achieving higher resolution through SRFM have recently been developed.
Confocal Fluorescence Microscopy01:16

Confocal Fluorescence Microscopy

Confocal microscopy is an advanced microscopic technique. The prime advantage of the confocal microscope over other microscopy techniques is its ability to block the out-of-focus light from the illuminated samples using pinholes. It is widely used with fluorescence optics to obtain high-resolution, sharp contrast images. Unlike optical microscopes, confocal microscopes use a focused beam of light laser to scan the entire sample surface at different z-planes. These microscopes are, therefore,...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

A membrane-permeable small molecule biosensor accesses intractable cells and animals without genetic manipulation.

bioRxiv : the preprint server for biology·2026
Same author

RhoG, Rac1 and Cdc42 cooperation in cell protrusion revealed by multiplexed optogenetics and biosensor imaging.

bioRxiv : the preprint server for biology·2026
Same author

Sensory neurons inhibit invadopodia and metastasis via direct CGRP-RAMP1-cAMP signaling to cancer cells.

bioRxiv : the preprint server for biology·2026
Same author

Selective Inhibition of Integrin β3 Topology Provides a Safer Antithrombotic Strategy.

Advanced science (Weinheim, Baden-Wurttemberg, Germany)·2026
Same author

A New Single-Chain, Genetically Encoded Biosensor for RhoB GTPase Based on FRET, Useful for Live-Cell Imaging.

Cells·2026
Same author

Engineered interfaces in Rac1 and Cdc42 biosensors enhance sensitivity and reduce cell perturbation.

Molecular biology of the cell·2026

Related Experiment Video

Updated: Jul 6, 2026

Digital Inline Holographic Microscopy (DIHM) of Weakly-scattering Subjects
10:16

Digital Inline Holographic Microscopy (DIHM) of Weakly-scattering Subjects

Published on: February 8, 2014

Digital differential interference contrast autofocus for high-resolution oil-immersion microscopy.

Feimo Shen1, Louis Hodgson, Jeffrey H Price

  • 1Department of Pharmacology and Lineberger Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.

Cytometry. Part a : the Journal of the International Society for Analytical Cytology
|April 9, 2008
PubMed
Summary

This article introduces a new digital autofocus method for high-resolution microscopy that uses existing light patterns to keep images sharp without needing extra light that could damage living cells. By analyzing specific image details, the system maintains focus during long experiments, even when using high-power lenses that are usually difficult to keep steady.

Keywords:
microscopy instrumentationtime-lapse imagingimage processingnumerical aperture

Frequently Asked Questions

More Related Videos

Phase Contrast and Differential Interference Contrast (DIC) Microscopy
06:49

Phase Contrast and Differential Interference Contrast (DIC) Microscopy

Published on: August 6, 2008

Highly Resolved Intravital Striped-illumination Microscopy of Germinal Centers
10:07

Highly Resolved Intravital Striped-illumination Microscopy of Germinal Centers

Published on: April 9, 2014

Related Experiment Videos

Last Updated: Jul 6, 2026

Digital Inline Holographic Microscopy (DIHM) of Weakly-scattering Subjects
10:16

Digital Inline Holographic Microscopy (DIHM) of Weakly-scattering Subjects

Published on: February 8, 2014

Phase Contrast and Differential Interference Contrast (DIC) Microscopy
06:49

Phase Contrast and Differential Interference Contrast (DIC) Microscopy

Published on: August 6, 2008

Highly Resolved Intravital Striped-illumination Microscopy of Germinal Centers
10:07

Highly Resolved Intravital Striped-illumination Microscopy of Germinal Centers

Published on: April 9, 2014

Area of Science:

  • Optical engineering and digital differential interference contrast microscopy
  • Cellular imaging and high-resolution microscopy instrumentation

Background:

Long-term imaging of living cells often suffers from focus instability caused by environmental fluctuations. Thermal changes frequently shift the focal plane during extended observation periods. Uneven sample surfaces also complicate maintaining sharp images across multiple viewing areas. Prior research has shown that standard phase contrast methods often fail due to distortion near plate edges. No prior work had resolved these limitations while simultaneously minimizing light-induced damage to sensitive biological specimens. High numerical aperture objectives provide excellent resolution but possess extremely shallow depths of field. This sensitivity makes even minor mechanical shifts highly problematic for automated time-lapse data collection. That uncertainty drove the development of more robust, non-invasive focusing strategies for high-magnification systems.

Purpose Of The Study:

The researchers aimed to develop a robust autofocus method for high-resolution, long-term microscopy of living cells. They sought to address the common problem of focus drift caused by temperature changes and uneven substrates. A significant challenge in this field involves maintaining sharp images while using high numerical aperture objectives. These lenses are essential for capturing intracellular protein dynamics but are highly sensitive to mechanical instability. Furthermore, the team wanted to avoid the phototoxicity associated with traditional fluorescence-based focusing techniques. They also aimed to overcome the image distortions caused by the meniscus effect in microtiter plates. This study investigates whether a digital filter applied to existing contrast patterns can provide sufficient precision. The authors intended to validate this approach across various specimen thicknesses to ensure broad applicability.

Main Methods:

The investigators developed a custom bandpass digital filter to quantify image sharpness from optical data. They performed experiments using a 60x oil-immersion objective with a high numerical aperture. The team removed the analyzer component from the light path to optimize the signal for their specific processing algorithm. They evaluated the system performance across 225 distinct fields of view to ensure statistical reliability. Researchers adjusted cell plating density to create a variety of specimen thicknesses for testing. This approach allowed for a comprehensive assessment of how sample geometry impacts focus stability. The team compared their digital results against theoretical modulation transfer function expectations. They conducted these trials under conditions mimicking standard long-term time-lapse microscopy protocols.

Main Results:

The digital filter achieved a precision of 8.6 nm, measured as the standard deviation across all tested fields. This high level of accuracy remained consistent regardless of whether the specimen was 9.47 or 33.20 micrometers thick. The researchers successfully maintained focus without the need for additional light exposure that typically causes phototoxicity. By removing the analyzer, the system maximized light throughput for the biosensor observations. The experimental data confirmed that the selected spatial frequencies were highly effective for maintaining sharp images. These findings indicate that the method effectively mitigates the meniscus distortion issues observed in phase contrast imaging. The system demonstrated robust performance across all 225 fields of view examined during the validation phase. This technique provides a reliable solution for high-resolution automated microscopy in microtiter plate formats.

Conclusions:

The authors demonstrate that their specialized digital filter achieves high-precision focus stability for demanding imaging tasks. Their approach successfully bypasses the meniscus-related artifacts common in alternative contrast techniques. This method allows researchers to maintain sharp focus without exposing samples to harmful additional light sources. The findings suggest that spatial frequency selection is the primary driver of this improved performance. Precision remains consistent regardless of the underlying specimen thickness within the tested range. These results indicate that high-numerical aperture systems can operate reliably over long durations. The study provides a viable path for improving automated microscopy workflows in biological research. Future applications may benefit from this stable, non-destructive focusing capability in various experimental settings.

The researchers propose a bandpass digital filter that evaluates image sharpness by analyzing specific spatial frequencies. This mechanism allows the system to maintain a precision of 8.6 nm, which is significantly more accurate than traditional hardware-based autofocus solutions that often require extra light exposure.

The authors utilize a 60x 1.45 numerical aperture oil-immersion objective. This specific lens is chosen for its superior light-gathering capabilities, whereas alternative phase contrast lenses often suffer from meniscus-induced distortions when imaging samples inside microtiter plates.

A high numerical aperture is necessary to capture the highest possible resolution and sensitivity required for tracking intracellular protein dynamics. While this high aperture provides excellent detail, it creates a very shallow depth of field that makes the system highly susceptible to even minor thermal or mechanical drifts.

The team employs differential interference contrast image data to calculate focus metrics. Unlike fluorescence-based autofocus, which requires additional light that can damage sensitive cells, this approach extracts focus information from the existing contrast pattern without increasing phototoxicity.

The researchers measured autofocus precision across specimens ranging from 9.47 to 33.20 micrometers in thickness. They observed that the precision remained stable across this entire range, confirming that the digital filter performance is independent of the sample depth.

The authors suggest that this technique removes the need for additional fluorescence exposure during the focusing process. By eliminating this extra light, researchers can protect living cells from phototoxicity while maintaining the high-resolution imaging required for long-term studies.