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Updated: Jul 5, 2026

Analysis of Complex Molecules and Their Reactions on Surfaces by Means of Cluster-Induced Desorption/Ionization Mass Spectrometry
Published on: March 1, 2020
Experimental evidence for an inverse hydrogen migration in arginine radicals
Shigeo Hayakawa1, Hiroshi Matsubara, Subhasis Panja
1Department of Chemistry, Graduate School of Science, Osaka Prefecture University, Osaka, Japan.
Abstract:
Radicals formed by electron transfer to protonated arginine have been predicted by theory to undergo an inverse migration of the hydrogen atom from the C(alpha) position to the guanidine carbon atom. Experiments are reported here that confirm that a fraction of arginine and arginine amide radicals undergo such an inverse hydrogen migration. The rearranged arginine and arginine amide C(alpha) radicals are detected as stable anions after charge inversion by collisions with Cs atoms of precursor cations at 3 and 50 keV kinetic energies. RRKM calculations on the B3-PMP2/aug-cc-pVTZ potential energy surface indicate that arginine radicals undergo rapid rotations of the side chain to reach conformations suitable for C(alpha)-H transfer, which is calculated to be fast (k > 10(9) s(-1)) in radicals formed by electron transfer. By contrast, H-atom transfer from the guanidine group onto the carboxyl or amide C=O groups is >50 times slower than the C(alpha)-H atom migration. The guanidine group in arginine radicals is predicted to be a poor hydrogen-atom donor but a good H-atom acceptor and thus can be viewed as a radical trap. This property can explain the frequent observation of nondissociating cation radicals in electron capture and electron transfer mass spectra of arginine-containing peptides.
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