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Updated: Jul 4, 2026

Spatial Separation of Molecular Conformers and Clusters
Published on: January 9, 2014
Dynamical clustering of counterions on flexible polyelectrolytes
Tak Shing Lo1, Boris Khusid, Joel Koplik
1Benjamin Levich Institute, City College of the City University of New York, New York, New York 10031, USA.
Abstract:
Molecular dynamics simulations are used to study the spatiotemporal dynamics of charge fluctuations around a polyelectrolyte molecule at charge densities above and below the classic counterion condensation threshold. Surprisingly, the counterions form weakly interacting clusters which exhibit slowly decaying short range orientational order. Local charge fluctuations create energy fluctuations at the order of k_(B)T that is sufficient to affect the polyelectrolyte interaction with an approaching ligand molecule. The predictions of the classical theory appear to be appropriate only over much longer time scales.
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