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Related Concept Videos

Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
Regulation of Expression Occurs at Multiple Steps02:24

Regulation of Expression Occurs at Multiple Steps

Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression Occurs at Multiple Steps02:24

Regulation of Expression Occurs at Multiple Steps

Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
mRNA Stability and Gene Expression02:51

mRNA Stability and Gene Expression

The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability

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Related Experiment Video

Updated: Jul 3, 2026

Measuring mRNA Levels Over Time During the Yeast S. cerevisiae Hypoxic Response
09:45

Measuring mRNA Levels Over Time During the Yeast S. cerevisiae Hypoxic Response

Published on: August 10, 2017

Hypoxic regulation of mRNA expression.

Lawrence B Gardner1, Paul G Corn

  • 1New York University School of Medicine and MD Anderson Cancer Center, USA. lawrence.gardner@med.nyu.edu

Cell Cycle (Georgetown, Tex.)
|July 8, 2008
PubMed
Summary

Tumor cells adapt to low oxygen (hypoxia) by altering metabolism and gene expression. This review explores how hypoxia-inducible factors and RNA decay regulate these adaptive phenotypes in cancer.

Area of Science:

  • Molecular Biology
  • Cancer Research
  • Cellular Physiology

Background:

  • Tumor hypoxia is a common characteristic of solid tumors.
  • Hypoxic conditions induce diverse cellular phenotypes crucial for tumor survival and adaptation.
  • These phenotypes include metabolic shifts, altered proliferation, and secretion of growth factors.

Purpose of the Study:

  • To review the mechanisms of gene expression regulation in hypoxic cells.
  • To highlight the role of hypoxia-inducible transcription factors (HIFs) in mediating hypoxia-induced phenotypes.
  • To discuss the emerging role of nonsense-mediated RNA decay in hypoxic gene regulation.

Main Methods:

  • Literature review of studies on tumor hypoxia and gene expression.
  • Analysis of established and emerging mechanisms of transcriptional and post-transcriptional regulation.

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Co-immunoprecipitation Assay Using Endogenous Nuclear Proteins from Cells Cultured Under Hypoxic Conditions
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Co-immunoprecipitation Assay Using Endogenous Nuclear Proteins from Cells Cultured Under Hypoxic Conditions

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Hypoxia Alters miRNAs Levels Involved in Non-Mendelian Inheritance of Autism Spectrum Disorder in Mice
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Hypoxia Alters miRNAs Levels Involved in Non-Mendelian Inheritance of Autism Spectrum Disorder in Mice

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Related Experiment Videos

Last Updated: Jul 3, 2026

Measuring mRNA Levels Over Time During the Yeast S. cerevisiae Hypoxic Response
09:45

Measuring mRNA Levels Over Time During the Yeast S. cerevisiae Hypoxic Response

Published on: August 10, 2017

Co-immunoprecipitation Assay Using Endogenous Nuclear Proteins from Cells Cultured Under Hypoxic Conditions
09:17

Co-immunoprecipitation Assay Using Endogenous Nuclear Proteins from Cells Cultured Under Hypoxic Conditions

Published on: August 2, 2018

Hypoxia Alters miRNAs Levels Involved in Non-Mendelian Inheritance of Autism Spectrum Disorder in Mice
09:13

Hypoxia Alters miRNAs Levels Involved in Non-Mendelian Inheritance of Autism Spectrum Disorder in Mice

Published on: July 11, 2025

  • Inclusion of recent laboratory data on nonsense-mediated RNA decay in hypoxia.

    • Main Results:

    • Hypoxia-inducible transcription factors, primarily HIF-1, are key regulators of gene expression under low oxygen.
    • Other transcription factors, activated by the integrated stress response, also contribute to hypoxic gene regulation.
    • Nonsense-mediated RNA decay is identified as a novel regulatory mechanism influenced by hypoxia.

    Conclusions:

    • Altered gene expression is central to the adaptive phenotypes observed in hypoxic tumor cells.
    • Understanding HIF-mediated and RNA decay pathways provides insights into tumor adaptation.
    • Further research into these regulatory mechanisms can reveal new therapeutic targets for hypoxic tumors.