Related Experiment Video
Updated: Jul 3, 2026

17:06
Co-analysis of Brain Structure and Function using fMRI and Diffusion-weighted Imaging
Published on: November 8, 2012
Automated white-matter tractography using a probabilistic diffusion tensor atlas: Application to temporal lobe
Donald J Hagler1, Mazyar E Ahmadi, Joshua Kuperman
1Multimodal Imaging Laboratory, University of California-San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA. dhagler@ucsd.edu
Human Brain Mapping
|August 2, 2008
Summary
An automated method uses a probabilistic atlas to label white matter tracts, improving diffusion MRI analysis. This atlas-based approach offers comparable or superior results to manual methods for studying white matter integrity in conditions like temporal lobe epilepsy.
Area of Science:
- Neuroimaging
- Neuroscience
- Medical Physics
Background:
- Diffusion-weighted magnetic resonance imaging (dMRI) is crucial for mapping white matter tracts.
- Manual fiber tracking is time-consuming and requires expert interpretation.
- Integrating anatomical information enhances the reliability of dMRI tractography.
Purpose of the Study:
- To develop and validate an automated method for labeling white matter fiber tracts using a probabilistic atlas.
- To compare the efficacy of atlas-based tract identification with manual methods.
- To assess white matter integrity in temporal lobe epilepsy (TLE) patients using fractional anisotropy (FA).
Main Methods:
- Construction of a probabilistic fiber atlas from 21 healthy controls and 21 TLE patients.
- Manual identification of 23 white matter tracts, requiring ~40 hours of expert analysis.
- Application of the automated atlas-based method for tract labeling and FA analysis in TLE.
Main Results:
- The automated atlas-based method successfully labeled white matter fiber tracts.
- Atlas-derived and manual fiber selection yielded similar patterns of results.
- Effect sizes for between-group comparisons (TLE vs. controls) were comparable or larger with atlas-derived fibers.
Conclusions:
- Automated labeling of white matter tracts using a probabilistic atlas is a reliable and efficient alternative to manual methods.
- This approach enhances the analysis of white matter integrity in neurological disorders.
- The atlas-based method facilitates large-scale dMRI studies and clinical applications.

