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GIMSAN: a Gibbs motif finder with significance analysis
1Department of Computer Science, Cornell University, Ithaca, NY 14853, USA.
Bioinformatics (Oxford, England)
|August 16, 2008
Abstract
Unlabelled:
We present GIMSAN (GIbbsMarkov with Significance ANalysis): a novel tool for de novo motif finding. GIMSAN combines GibbsMarkov, our variant of the Gibbs Sampler, described here for the first time, with our recently introduced significance analysis.
Availability:
GIMSAN is currently available as a web application and a stand-alone application on Unix and PBS (Portable Batch System) cluster through links from http://www.cs.cornell.edu/~keich.

